STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A7J50_0845Pfam:pfam00441 Acyl-CoA dehydrogenase, C-terminal domain. (378 aa)    
Predicted Functional Partners:
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 0.869
A7J50_3201
Pfam:pfam01636 Phosphotransferase enzyme family.
 
 0.828
A7J50_4424
Pfam:pfam02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.771
A7J50_4440
Electron transfer flavoprotein, alpha subunit; Pfam:pfam00766 Electron transfer flavoprotein FAD-binding domain.
 
 0.753
nuoC
NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
   
 0.705
A7J50_5388
Pfam:pfam00766 Electron transfer flavoprotein FAD-binding domain.
 
 
 0.687
A7J50_3273
Pyoverdine synthetase I; Pfam:pfam00501 AMP-binding enzyme.
  
 
 0.681
A7J50_4441
Pfam:pfam01012 Electron transfer flavoprotein domain.
 
 
 0.640
A7J50_2832
Putative long-chain-fatty-acid-CoA ligase; Pfam:pfam00501 AMP-binding enzyme.
  
 0.595
A7J50_3514
acyl-CoA synthetase.
  
 0.595
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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