STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A7J50_1982Hypothetical protein. (272 aa)    
Predicted Functional Partners:
A7J50_1416
Pfam:pfam03938 Outer membrane protein (OmpH-like).
 
 
 0.798
A7J50_4180
Dehydrogenase; Pfam:pfam11306 Protein of unknown function (DUF3108).
 
 
 
 0.774
A7J50_2004
Dehydrogenase.
  
     0.773
A7J50_1302
Hypothetical protein.
  
     0.762
A7J50_1683
Hypothetical protein.
  
     0.760
A7J50_0872
Pfam:pfam13116 Protein of unknown function.
  
     0.756
A7J50_1684
Cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.752
A7J50_5680
Hypothetical protein.
  
     0.750
A7J50_0839
Cytochrome d ubiquinol oxidase subunit III; Pfam:pfam06295 Protein of unknown function (DUF1043).
  
   
 0.741
A7J50_1682
PasA protein.
  
     0.741
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.