STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A7J50_3100ABC transporter substrate-binding protein; Pfam:pfam13379 NMT1-like family. (399 aa)    
Predicted Functional Partners:
A7J50_3099
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.969
A7J50_3102
Acyl-CoA dehydrogenase.
 
    0.962
A7J50_3101
Pfam:pfam00005 ABC transporter.
 
  
 0.947
A7J50_3103
Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.816
A7J50_2264
Sulfonate ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.672
A7J50_0135
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.665
A7J50_0134
Sulfonate ABC transporter ATP-binding protein; Pfam:pfam00005 ABC transporter.
 
  
 0.662
A7J50_2691
ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.644
A7J50_0244
Taurine ABC transporter permease; Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.626
A7J50_1574
Pfam:pfam00528 Binding-protein-dependent transport system inner membrane component.
 
  
 0.617
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.