STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A7J50_3208Pfam:pfam05088 Bacterial NAD-glutamate dehydrogenase. (1622 aa)    
Predicted Functional Partners:
A7J50_0403
Pfam:pfam01645 Conserved region in glutamate synthase.
     
 0.939
A7J50_0440
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
    
 0.925
A7J50_3841
Glutaminase; Pfam:pfam00710 Asparaginase; Belongs to the asparaginase 1 family.
    
 0.913
A7J50_5051
Pfam:pfam00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
    
 0.913
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
 
 
  0.911
A7J50_0404
Glutamate synthase, NADH/NADPH, small subunit 2; Pfam:pfam14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster.
     
 0.910
A7J50_0334
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
     
 0.907
A7J50_1637
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
     
 0.907
A7J50_2166
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
     
 0.907
A7J50_2449
Pfam:pfam00120 Glutamine synthetase, catalytic domain.
     
 0.907
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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