STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A7J50_3762Hypothetical protein. (79 aa)    
Predicted Functional Partners:
A7J50_3757
Hypothetical protein.
       0.661
A7J50_3758
Hypothetical protein.
       0.661
A7J50_3759
ArsR family transcriptional regulator; Pfam:pfam08875 Domain of unknown function (DUF1833).
       0.661
A7J50_3760
Membrane protein.
       0.661
A7J50_3761
Hypothetical protein; Pfam:pfam06791 Prophage tail length tape measure protein.
       0.661
A7J50_3763
Hypothetical protein.
       0.598
A7J50_3756
Hypothetical protein.
       0.521
A7J50_3764
Hypothetical protein; Pfam:pfam02368 Bacterial Ig-like domain (group 2).
       0.425
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.