STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A7J50_3781Hypothetical protein. (75 aa)    
Predicted Functional Partners:
A7J50_3776
Hypothetical protein.
       0.527
A7J50_3777
Hypothetical protein.
       0.527
A7J50_3778
Hypothetical protein.
       0.527
A7J50_3779
Hypothetical protein.
       0.527
A7J50_3780
Hypothetical protein.
       0.527
A7J50_3772
SPP1 family phage head morphogenesis protein.
       0.467
A7J50_3773
Hypothetical protein; Pfam:pfam13264 Domain of unknown function (DUF4055).
       0.467
A7J50_3774
Terminase; Pfam:pfam03237 Terminase-like family.
       0.467
A7J50_3775
Hypothetical protein; Pfam:pfam10045 Uncharacterized conserved protein (DUF2280).
       0.467
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.