Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A7J50_1546 | A7J50_3273 | hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like. | Pyoverdine synthetase I; Pfam:pfam00501 AMP-binding enzyme. | 0.630 |
A7J50_1546 | A7J50_3975 | hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like. | Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family. | 0.454 |
A7J50_3273 | A7J50_1546 | Pyoverdine synthetase I; Pfam:pfam00501 AMP-binding enzyme. | hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like. | 0.630 |
A7J50_3273 | A7J50_3974 | Pyoverdine synthetase I; Pfam:pfam00501 AMP-binding enzyme. | Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.801 |
A7J50_3273 | A7J50_3975 | Pyoverdine synthetase I; Pfam:pfam00501 AMP-binding enzyme. | Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family. | 0.549 |
A7J50_3974 | A7J50_3273 | Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. | Pyoverdine synthetase I; Pfam:pfam00501 AMP-binding enzyme. | 0.801 |
A7J50_3974 | A7J50_3975 | Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. | Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family. | 0.560 |
A7J50_3975 | A7J50_1546 | Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family. | hydroxymethylglutaryl-CoA lyase; Pfam:pfam00682 HMGL-like. | 0.454 |
A7J50_3975 | A7J50_3273 | Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family. | Pyoverdine synthetase I; Pfam:pfam00501 AMP-binding enzyme. | 0.549 |
A7J50_3975 | A7J50_3974 | Pfam:pfam02515 CoA-transferase family III; Belongs to the CoA-transferase III family. | Pfam:pfam00378 Enoyl-CoA hydratase/isomerase family; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.560 |