STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A7J50_4427Pfam:pfam00034 Cytochrome c. (287 aa)    
Predicted Functional Partners:
A7J50_0850
Cytochrome B; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.768
A7J50_0849
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 
 0.681
A7J50_3378
Hypothetical protein.
  
 
 0.681
A7J50_0062
MFS transporter; Pfam:pfam00510 Cytochrome c oxidase subunit III.
  
 
 0.629
A7J50_4879
Pfam:pfam00510 Cytochrome c oxidase subunit III.
  
 
 0.629
A7J50_4252
Peptidase S41; Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO.
  
 
 0.618
A7J50_4256
Pfam:pfam02433 Cytochrome C oxidase, mono-heme subunit/FixO.
  
 
 0.618
A7J50_4251
Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.615
A7J50_4255
Pfam:pfam00115 Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.615
A7J50_4257
Cytochrome c oxidase, cbb3-type, CcoQ subunit; Pfam:pfam05545 Cbb3-type cytochrome oxidase component FixQ.
 
 
 0.586
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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