STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A7J50_5694Pfam:pfam13336 Acetyl-CoA hydrolase/transferase C-terminal domain. (640 aa)    
Predicted Functional Partners:
A7J50_0380
Pfam:pfam09650 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn).
  
     0.489
A7J50_4890
Pfam:pfam00106 short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.484
A7J50_0382
Poly(3-hydroxyalkanoate) granule-associated protein PhaF; Pfam:pfam05597 Poly(hydroxyalcanoate) granule associated protein (phasin).
  
     0.477
A7J50_0768
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.468
A7J50_4721
Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.451
A7J50_0381
Poly(3-hydroxyalkanoate) granule-associated protein PhaI; Pfam:pfam05597 Poly(hydroxyalcanoate) granule associated protein (phasin).
  
     0.443
A7J50_1949
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.436
A7J50_4331
Pfam:pfam00285 Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.436
plsB
Pfam:pfam01553 Acyltransferase; Belongs to the GPAT/DAPAT family.
  
     0.426
fadB
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.408
Your Current Organism:
Pseudomonas antarctica
NCBI taxonomy Id: 219572
Other names: CCUG 49625, DSM 15318, LMG 22709, LMG:22709, MTCC 4992, Pseudomonas antarctica Reddy et al. 2004, strain CMS 35
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