STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571405_00819Unannotated protein. (373 aa)    
Predicted Functional Partners:
GCA_001571405_00209
Unannotated protein.
 
 
 0.976
GCA_001571405_00384
Unannotated protein.
  
 
 0.892
GCA_001571405_01230
Unannotated protein.
  
 
 0.892
GCA_001571405_00446
Unannotated protein.
  
 
 0.852
GCA_001571405_00452
Unannotated protein.
  
 
 0.852
GCA_001571405_00548
Unannotated protein.
  
 
 0.852
GCA_001571405_01650
Unannotated protein.
  
 
 0.852
GCA_001571405_01942
Unannotated protein.
  
 
 0.852
GCA_001571405_02062
Unannotated protein.
  
 
 0.852
glmS
Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.738
Your Current Organism:
Methanoculleus thermophilus
NCBI taxonomy Id: 2200
Other names: ATCC 33837, DSM 2373, M. thermophilus, Methaniculleus thermophilicus, Methanoculleus thermophilicum, Methanoculleus thermophilicus, Methanogenium frittonii, Methanogenium thermophilicum, Methanogenium thermophilum, OCM 174, strain CR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.