Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001571405_00806 | GCA_001571405_00940 | GCA_001571405_00806 | GCA_001571405_00940 | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the N-terminal section; belongs to the KAE1 / TsaD family. | Unannotated protein. | 0.518 |
GCA_001571405_00806 | ubiX | GCA_001571405_00806 | GCA_001571405_00942 | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the N-terminal section; belongs to the KAE1 / TsaD family. | Unannotated protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.523 |
GCA_001571405_00940 | GCA_001571405_00806 | GCA_001571405_00940 | GCA_001571405_00806 | Unannotated protein. | Unannotated protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function. In the N-terminal section; belongs to the KAE1 / TsaD family. | 0.518 |
GCA_001571405_00940 | GCA_001571405_00941 | GCA_001571405_00940 | GCA_001571405_00941 | Unannotated protein. | Unannotated protein. | 0.868 |
GCA_001571405_00940 | GCA_001571405_00943 | GCA_001571405_00940 | GCA_001571405_00943 | Unannotated protein. | Unannotated protein. | 0.814 |
GCA_001571405_00940 | GCA_001571405_00944 | GCA_001571405_00940 | GCA_001571405_00944 | Unannotated protein. | Unannotated protein. | 0.543 |
GCA_001571405_00940 | GCA_001571405_01403 | GCA_001571405_00940 | GCA_001571405_01403 | Unannotated protein. | Unannotated protein. | 0.406 |
GCA_001571405_00940 | GCA_001571405_02059 | GCA_001571405_00940 | GCA_001571405_02059 | Unannotated protein. | Unannotated protein; Belongs to the UPF0107 family. | 0.997 |
GCA_001571405_00940 | GCA_001571405_02221 | GCA_001571405_00940 | GCA_001571405_02221 | Unannotated protein. | Unannotated protein. | 0.426 |
GCA_001571405_00940 | cofD | GCA_001571405_00940 | GCA_001571405_00945 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.410 |
GCA_001571405_00940 | ubiX | GCA_001571405_00940 | GCA_001571405_00942 | Unannotated protein. | Unannotated protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.839 |
GCA_001571405_00941 | GCA_001571405_00940 | GCA_001571405_00941 | GCA_001571405_00940 | Unannotated protein. | Unannotated protein. | 0.868 |
GCA_001571405_00941 | GCA_001571405_00943 | GCA_001571405_00941 | GCA_001571405_00943 | Unannotated protein. | Unannotated protein. | 0.798 |
GCA_001571405_00941 | GCA_001571405_00944 | GCA_001571405_00941 | GCA_001571405_00944 | Unannotated protein. | Unannotated protein. | 0.543 |
GCA_001571405_00941 | GCA_001571405_02059 | GCA_001571405_00941 | GCA_001571405_02059 | Unannotated protein. | Unannotated protein; Belongs to the UPF0107 family. | 0.426 |
GCA_001571405_00941 | GCA_001571405_02221 | GCA_001571405_00941 | GCA_001571405_02221 | Unannotated protein. | Unannotated protein. | 0.401 |
GCA_001571405_00941 | cofD | GCA_001571405_00941 | GCA_001571405_00945 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the phosphoenolpyruvate moiety from enoylpyruvoyl-2-diphospho-5'-guanosine (EPPG) to 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) with the formation of dehydro coenzyme F420-0 and GMP. | 0.411 |
GCA_001571405_00941 | ubiX | GCA_001571405_00941 | GCA_001571405_00942 | Unannotated protein. | Unannotated protein; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. | 0.996 |
GCA_001571405_00943 | GCA_001571405_00940 | GCA_001571405_00943 | GCA_001571405_00940 | Unannotated protein. | Unannotated protein. | 0.814 |
GCA_001571405_00943 | GCA_001571405_00941 | GCA_001571405_00943 | GCA_001571405_00941 | Unannotated protein. | Unannotated protein. | 0.798 |
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