STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571405_01063Unannotated protein. (263 aa)    
Predicted Functional Partners:
GCA_001571405_00089
Unannotated protein.
  
 
 0.989
GCA_001571405_01478
Unannotated protein.
    
 0.720
pcn
Unannotated protein; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. Belongs to the PCNA family.
 
   
 0.710
smc
Unannotated protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.710
GCA_001571405_00222
Unannotated protein.
    
 0.631
GCA_001571405_01064
Unannotated protein; Belongs to the small heat shock protein (HSP20) family.
       0.587
GCA_001571405_00375
Unannotated protein.
 
   
 0.554
GCA_001571405_01129
Unannotated protein.
  
     0.544
cetZ
Unannotated protein; Involved in cell shape control; Belongs to the CetZ family.
 
 
 0.531
GCA_001571405_00294
Unannotated protein.
  
    0.529
Your Current Organism:
Methanoculleus thermophilus
NCBI taxonomy Id: 2200
Other names: ATCC 33837, DSM 2373, M. thermophilus, Methaniculleus thermophilicus, Methanoculleus thermophilicum, Methanoculleus thermophilicus, Methanogenium frittonii, Methanogenium thermophilicum, Methanogenium thermophilum, OCM 174, strain CR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.