Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001571405_01209 | GCA_001571405_01210 | GCA_001571405_01209 | GCA_001571405_01210 | Unannotated protein. | Unannotated protein. | 0.861 |
GCA_001571405_01209 | GCA_001571405_01213 | GCA_001571405_01209 | GCA_001571405_01213 | Unannotated protein. | Unannotated protein. | 0.504 |
GCA_001571405_01209 | GCA_001571405_01215 | GCA_001571405_01209 | GCA_001571405_01215 | Unannotated protein. | Unannotated protein. | 0.473 |
GCA_001571405_01209 | folD | GCA_001571405_01209 | GCA_001571405_01211 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.813 |
GCA_001571405_01209 | glyA | GCA_001571405_01209 | GCA_001571405_01212 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. Also exhibits THF-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.801 |
GCA_001571405_01209 | smc | GCA_001571405_01209 | GCA_001571405_01214 | Unannotated protein. | Unannotated protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.474 |
GCA_001571405_01210 | GCA_001571405_01209 | GCA_001571405_01210 | GCA_001571405_01209 | Unannotated protein. | Unannotated protein. | 0.861 |
GCA_001571405_01210 | GCA_001571405_01213 | GCA_001571405_01210 | GCA_001571405_01213 | Unannotated protein. | Unannotated protein. | 0.503 |
GCA_001571405_01210 | GCA_001571405_01215 | GCA_001571405_01210 | GCA_001571405_01215 | Unannotated protein. | Unannotated protein. | 0.473 |
GCA_001571405_01210 | folD | GCA_001571405_01210 | GCA_001571405_01211 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.892 |
GCA_001571405_01210 | glyA | GCA_001571405_01210 | GCA_001571405_01212 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. Also exhibits THF-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.897 |
GCA_001571405_01210 | smc | GCA_001571405_01210 | GCA_001571405_01214 | Unannotated protein. | Unannotated protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.476 |
GCA_001571405_01213 | GCA_001571405_01209 | GCA_001571405_01213 | GCA_001571405_01209 | Unannotated protein. | Unannotated protein. | 0.504 |
GCA_001571405_01213 | GCA_001571405_01210 | GCA_001571405_01213 | GCA_001571405_01210 | Unannotated protein. | Unannotated protein. | 0.503 |
GCA_001571405_01213 | GCA_001571405_01215 | GCA_001571405_01213 | GCA_001571405_01215 | Unannotated protein. | Unannotated protein. | 0.804 |
GCA_001571405_01213 | folD | GCA_001571405_01213 | GCA_001571405_01211 | Unannotated protein. | Unannotated protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.504 |
GCA_001571405_01213 | glyA | GCA_001571405_01213 | GCA_001571405_01212 | Unannotated protein. | Unannotated protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. Also exhibits THF-independent aldolase activity toward beta- hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.505 |
GCA_001571405_01213 | smc | GCA_001571405_01213 | GCA_001571405_01214 | Unannotated protein. | Unannotated protein; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.804 |
GCA_001571405_01215 | GCA_001571405_01209 | GCA_001571405_01215 | GCA_001571405_01209 | Unannotated protein. | Unannotated protein. | 0.473 |
GCA_001571405_01215 | GCA_001571405_01210 | GCA_001571405_01215 | GCA_001571405_01210 | Unannotated protein. | Unannotated protein. | 0.473 |
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