STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571405_01416Unannotated protein. (427 aa)    
Predicted Functional Partners:
GCA_001571405_01417
Unannotated protein.
 
     0.830
GCA_001571405_01444
Unannotated protein.
 
    0.730
GCA_001571405_01488
Unannotated protein.
  
     0.672
GCA_001571405_00860
Unannotated protein.
  
     0.668
GCA_001571405_00331
Unannotated protein.
  
     0.655
GCA_001571405_01008
Unannotated protein.
  
     0.643
GCA_001571405_01891
Unannotated protein.
 
     0.591
GCA_001571405_01420
Unannotated protein.
  
     0.571
GCA_001571405_01415
Unannotated protein.
       0.561
GCA_001571405_00221
Unannotated protein.
  
     0.516
Your Current Organism:
Methanoculleus thermophilus
NCBI taxonomy Id: 2200
Other names: ATCC 33837, DSM 2373, M. thermophilus, Methaniculleus thermophilicus, Methanoculleus thermophilicum, Methanoculleus thermophilicus, Methanogenium frittonii, Methanogenium thermophilicum, Methanogenium thermophilum, OCM 174, strain CR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.