STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571405_01474Unannotated protein. (330 aa)    
Predicted Functional Partners:
GCA_001571405_00516
Unannotated protein.
 
     0.664
GCA_001571405_01472
Unannotated protein.
       0.509
GCA_001571405_01473
Unannotated protein.
       0.506
GCA_001571405_01799
Unannotated protein.
  
     0.457
GCA_001571405_01241
Unannotated protein.
  
     0.440
GCA_001571405_01091
Unannotated protein.
  
     0.438
GCA_001571405_00069
Unannotated protein; Belongs to the small heat shock protein (HSP20) family.
  
     0.430
GCA_001571405_01127
Unannotated protein.
  
     0.417
GCA_001571405_00174
Unannotated protein.
  
     0.408
Your Current Organism:
Methanoculleus thermophilus
NCBI taxonomy Id: 2200
Other names: ATCC 33837, DSM 2373, M. thermophilus, Methaniculleus thermophilicus, Methanoculleus thermophilicum, Methanoculleus thermophilicus, Methanogenium frittonii, Methanogenium thermophilicum, Methanogenium thermophilum, OCM 174, strain CR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.