STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571405_01699Unannotated protein. (192 aa)    
Predicted Functional Partners:
aroE
Unannotated protein; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
  
 
  0.891
GCA_001571405_01700
Unannotated protein.
 
    
0.779
GCA_001571405_01562
Unannotated protein.
  
    0.621
GCA_001571405_01670
Unannotated protein.
  
    0.621
GCA_001571405_01776
Unannotated protein.
  
    0.621
GCA_001571405_00673
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.570
GCA_001571405_00820
Unannotated protein; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.570
mfnA
Unannotated protein; Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis; Belongs to the group II decarboxylase family. MfnA subfamily.
  
 
 0.559
GCA_001571405_00597
Unannotated protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.557
gap
Unannotated protein.
     
 0.552
Your Current Organism:
Methanoculleus thermophilus
NCBI taxonomy Id: 2200
Other names: ATCC 33837, DSM 2373, M. thermophilus, Methaniculleus thermophilicus, Methanoculleus thermophilicum, Methanoculleus thermophilicus, Methanogenium frittonii, Methanogenium thermophilicum, Methanogenium thermophilum, OCM 174, strain CR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.