Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001571405_00080 | GCA_001571405_00336 | GCA_001571405_00080 | GCA_001571405_00336 | Unannotated protein. | Unannotated protein. | 0.477 |
GCA_001571405_00080 | GCA_001571405_01021 | GCA_001571405_00080 | GCA_001571405_01021 | Unannotated protein. | Unannotated protein. | 0.477 |
GCA_001571405_00080 | GCA_001571405_01034 | GCA_001571405_00080 | GCA_001571405_01034 | Unannotated protein. | Unannotated protein. | 0.477 |
GCA_001571405_00080 | GCA_001571405_01809 | GCA_001571405_00080 | GCA_001571405_01809 | Unannotated protein. | Unannotated protein. | 0.926 |
GCA_001571405_00086 | GCA_001571405_00179 | GCA_001571405_00086 | GCA_001571405_00179 | Unannotated protein. | Unannotated protein. | 0.989 |
GCA_001571405_00086 | GCA_001571405_00336 | GCA_001571405_00086 | GCA_001571405_00336 | Unannotated protein. | Unannotated protein. | 0.829 |
GCA_001571405_00086 | GCA_001571405_01021 | GCA_001571405_00086 | GCA_001571405_01021 | Unannotated protein. | Unannotated protein. | 0.628 |
GCA_001571405_00086 | GCA_001571405_01034 | GCA_001571405_00086 | GCA_001571405_01034 | Unannotated protein. | Unannotated protein. | 0.628 |
GCA_001571405_00086 | GCA_001571405_01809 | GCA_001571405_00086 | GCA_001571405_01809 | Unannotated protein. | Unannotated protein. | 0.944 |
GCA_001571405_00086 | GCA_001571405_01811 | GCA_001571405_00086 | GCA_001571405_01811 | Unannotated protein. | Unannotated protein. | 0.822 |
GCA_001571405_00086 | cheB | GCA_001571405_00086 | GCA_001571405_00337 | Unannotated protein. | Unannotated protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.999 |
GCA_001571405_00086 | cheD | GCA_001571405_00086 | GCA_001571405_00340 | Unannotated protein. | Unannotated protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.917 |
GCA_001571405_00179 | GCA_001571405_00086 | GCA_001571405_00179 | GCA_001571405_00086 | Unannotated protein. | Unannotated protein. | 0.989 |
GCA_001571405_00179 | GCA_001571405_00336 | GCA_001571405_00179 | GCA_001571405_00336 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_001571405_00179 | GCA_001571405_01021 | GCA_001571405_00179 | GCA_001571405_01021 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_001571405_00179 | GCA_001571405_01034 | GCA_001571405_00179 | GCA_001571405_01034 | Unannotated protein. | Unannotated protein. | 0.998 |
GCA_001571405_00179 | GCA_001571405_01809 | GCA_001571405_00179 | GCA_001571405_01809 | Unannotated protein. | Unannotated protein. | 0.957 |
GCA_001571405_00179 | GCA_001571405_01811 | GCA_001571405_00179 | GCA_001571405_01811 | Unannotated protein. | Unannotated protein. | 0.969 |
GCA_001571405_00179 | cheB | GCA_001571405_00179 | GCA_001571405_00337 | Unannotated protein. | Unannotated protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.989 |
GCA_001571405_00179 | cheD | GCA_001571405_00179 | GCA_001571405_00340 | Unannotated protein. | Unannotated protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.957 |
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