STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uppSUnannotated protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids. (259 aa)    
Predicted Functional Partners:
GCA_001571405_01938
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
 
 0.993
GCA_001571405_00873
Unannotated protein; Belongs to the FPP/GGPP synthase family.
 
 
 0.962
GCA_001571405_01909
Unannotated protein.
       0.857
GCA_001571405_01403
Unannotated protein.
  
  
 0.767
pyrG
Unannotated protein; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
    0.697
nusA
Unannotated protein; Participates in transcription termination. Belongs to the NusA family.
  
    0.688
nusA-2
Unannotated protein; Participates in transcription termination. Belongs to the NusA family.
  
    0.688
pyrH
Unannotated protein; Catalyzes the reversible phosphorylation of UMP to UDP.
  
  
 0.661
GCA_001571405_01174
Unannotated protein.
  
  
 0.661
GCA_001571405_01907
Unannotated protein.
  
  
0.602
Your Current Organism:
Methanoculleus thermophilus
NCBI taxonomy Id: 2200
Other names: ATCC 33837, DSM 2373, M. thermophilus, Methaniculleus thermophilicus, Methanoculleus thermophilicum, Methanoculleus thermophilicus, Methanogenium frittonii, Methanogenium thermophilicum, Methanogenium thermophilum, OCM 174, strain CR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.