STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001571405_02069Unannotated protein. (73 aa)    
Predicted Functional Partners:
GCA_001571405_02166
Unannotated protein.
  
  
 0.785
GCA_001571405_00375
Unannotated protein.
  
  
 0.742
GCA_001571405_02068
Unannotated protein.
       0.548
GCA_001571405_00336
Unannotated protein.
    
 
 0.486
GCA_001571405_01021
Unannotated protein.
    
 
 0.486
GCA_001571405_01034
Unannotated protein.
    
 
 0.486
GCA_001571405_00665
Unannotated protein.
  
    0.427
GCA_001571405_02120
Unannotated protein.
  
  
 0.417
Your Current Organism:
Methanoculleus thermophilus
NCBI taxonomy Id: 2200
Other names: ATCC 33837, DSM 2373, M. thermophilus, Methaniculleus thermophilicus, Methanoculleus thermophilicum, Methanoculleus thermophilicus, Methanogenium frittonii, Methanogenium thermophilicum, Methanogenium thermophilum, OCM 174, strain CR-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.