Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| STY0155 | STY0156 | gene:17584194 | gene:17584195 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | 0.921 |
| STY0155 | STY0517 | gene:17584194 | gene:17584539 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | 0.775 |
| STY0155 | STY1186 | gene:17584194 | gene:17585153 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Glucans biosynthesis protein; Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane. | 0.767 |
| STY0155 | STY1246 | gene:17584194 | gene:17585210 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Putative lipoprotein; Orthologue of E. coli YCFL_ECOLI; Fasta hit to YCFL_ECOLI (125 aa), 81% identity in 125 aa overlap. | 0.772 |
| STY0155 | STY1560 | gene:17584194 | gene:17585500 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Putative secreted protein; Orthologue of E. coli YNFB_ECOLI; Fasta hit to YNFB_ECOLI (113 aa), 81% identity in 113 aa overlap; Belongs to the UPF0482 family. | 0.772 |
| STY0155 | STY1662 | gene:17584194 | gene:17585597 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Putative membrane protein; Orthologue of E. coli YDGK_ECOLI; Fasta hit to YDGK_ECOLI (146 aa), 83% identity in 146 aa overlap. | 0.770 |
| STY0155 | STY1788 | gene:17584194 | gene:17585722 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Putative membrane protein; Similar to Escherichia coli hypothetical 20.4 kDa protein in pfkB-cedA intergenic region yniB SW:YNIB_ECOLI (P76208) (178 aa) fasta scores: E(): 0, 83.7% id in 178 aa, and to Yersinia pestis putative yfeABCD regulator YfeE yfeE SW:YFEE_YERPE (Q56956) (184 aa) fasta scores: E(): 0, 67.4% id in 181 aa; Orthologue of E. coli YNIB_ECOLI; Fasta hit to YNIB_ECOLI (178 aa), 84% identity in 178 aa overlap. | 0.764 |
| STY0155 | STY3262 | gene:17584194 | gene:17587134 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Conserved hypothetical protein; Orthologue of E. coli yggN (YGGN_ECOLI); Fasta hit to YGGN_ECOLI (239 aa), 88% identity in 239 aa overlap. | 0.772 |
| STY0155 | STY3968 | gene:17584194 | gene:17587827 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Putative lipoprotein; Orthologue of E. coli o135 (YIDQ_ECOLI); Fasta hit to YIDQ_ECOLI (135 aa), 84% identity in 109 aa overlap. Contains a possible N-terminal signal sequence. | 0.769 |
| STY0155 | yrfF | gene:17584194 | gene:17588132 | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | Putative membrane protein; Similar to Escherichia coli hypothetical 79.5 kDa protein in mrcA-pckA intergenic region YrfF SW:YRFF_ECOLI (P45800) (711 aa) fasta scores: E(): 0, 83.9% id in 710 aa, and to Proteus mirabilis UmoB TR:O86988 (EMBL:U66822) (702 aa) fasta scores: E(): 0, 39.2% id in 701 aa. This CDS contains a signal sequence and several transmembrane regions. | 0.796 |
| STY0156 | STY0155 | gene:17584195 | gene:17584194 | Preprotein translocase SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | 0.921 |
| STY0517 | STY0155 | gene:17584539 | gene:17584194 | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | Conserved hypothetical protein; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family. | 0.775 |
| STY0517 | STY1186 | gene:17584539 | gene:17585153 | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | Glucans biosynthesis protein; Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane. | 0.728 |
| STY0517 | STY1246 | gene:17584539 | gene:17585210 | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | Putative lipoprotein; Orthologue of E. coli YCFL_ECOLI; Fasta hit to YCFL_ECOLI (125 aa), 81% identity in 125 aa overlap. | 0.774 |
| STY0517 | STY1560 | gene:17584539 | gene:17585500 | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | Putative secreted protein; Orthologue of E. coli YNFB_ECOLI; Fasta hit to YNFB_ECOLI (113 aa), 81% identity in 113 aa overlap; Belongs to the UPF0482 family. | 0.765 |
| STY0517 | STY1662 | gene:17584539 | gene:17585597 | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | Putative membrane protein; Orthologue of E. coli YDGK_ECOLI; Fasta hit to YDGK_ECOLI (146 aa), 83% identity in 146 aa overlap. | 0.764 |
| STY0517 | STY1788 | gene:17584539 | gene:17585722 | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | Putative membrane protein; Similar to Escherichia coli hypothetical 20.4 kDa protein in pfkB-cedA intergenic region yniB SW:YNIB_ECOLI (P76208) (178 aa) fasta scores: E(): 0, 83.7% id in 178 aa, and to Yersinia pestis putative yfeABCD regulator YfeE yfeE SW:YFEE_YERPE (Q56956) (184 aa) fasta scores: E(): 0, 67.4% id in 181 aa; Orthologue of E. coli YNIB_ECOLI; Fasta hit to YNIB_ECOLI (178 aa), 84% identity in 178 aa overlap. | 0.681 |
| STY0517 | STY3262 | gene:17584539 | gene:17587134 | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | Conserved hypothetical protein; Orthologue of E. coli yggN (YGGN_ECOLI); Fasta hit to YGGN_ECOLI (239 aa), 88% identity in 239 aa overlap. | 0.658 |
| STY0517 | STY3968 | gene:17584539 | gene:17587827 | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | Putative lipoprotein; Orthologue of E. coli o135 (YIDQ_ECOLI); Fasta hit to YIDQ_ECOLI (135 aa), 84% identity in 109 aa overlap. Contains a possible N-terminal signal sequence. | 0.526 |
| STY0517 | yrfF | gene:17584539 | gene:17588132 | Conserved hypothetical protein; Orthologue of E. coli ybaJ (YBAJ_ECOLI); Fasta hit to YBAJ_ECOLI (124 aa), 95% identity in 124 aa overlap. | Putative membrane protein; Similar to Escherichia coli hypothetical 79.5 kDa protein in mrcA-pckA intergenic region YrfF SW:YRFF_ECOLI (P45800) (711 aa) fasta scores: E(): 0, 83.9% id in 710 aa, and to Proteus mirabilis UmoB TR:O86988 (EMBL:U66822) (702 aa) fasta scores: E(): 0, 39.2% id in 701 aa. This CDS contains a signal sequence and several transmembrane regions. | 0.559 |
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