STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
STY0435Branched chain amino acid transport system II carrier protein; Component of the LIV-II transport system for branched-chain amino acids. This LIV-II transport system may be H(+)-coupled (By similarity). (439 aa)    
Predicted Functional Partners:
STY4423
Maltose transport inner membrane protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane.
      
 0.665
STY4424
Maltose transport inner membrane protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane.
      
 0.620
STY0438
Proline-specific permease ProY; Fasta hit to CYCA_ECOLI (470 aa), 42% identity in 454 aa overlap; Fasta hit to PHEP_ECOLI (458 aa), 46% identity in 447 aa overlap; Fasta hit to LYSP_ECOLI (488 aa), 35% identity in 448 aa overlap; Fasta hit to YIFK_ECOLI (461 aa), 45% identity in 452 aa overlap; Fasta hit to GABP_ECOLI (466 aa), 34% identity in 451 aa overlap; Fasta hit to ANSP_ECOLI (499 aa), 38% identity in 446 aa overlap; Fasta hit to MMUP_ECOLI (475 aa), 36% identity in 457 aa overlap; Fasta hit to AROP_ECOLI (457 aa), 44% identity in 450 aa overlap; Orthologue of E. coli PROY_ECOLI [...]
 
  
 0.587
STY3783
Glycerol uptake facilitator protein; Fasta hit to AQPZ_ECOLI (231 aa), 32% identity in 246 aa overlap; Orthologue of E. coli glpF (GLPF_ECOLI); Fasta hit to GLPF_ECOLI (281 aa), 93% identity in 281 aa overlap. Contains multiple possible membrane spanning hydrophobic domains; Belongs to the MIP/aquaporin (TC 1.A.8) family.
      
 0.578
STY3405
Probable membrane transport protein; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
 
   
 0.527
STY0006
Putative amino-acid transport protein; Similar to Bacillus subtilis amino acid carrier protein alst ALST SW:ALST_BACSU (Q45068; P40743) fasta scores: E(): 0, 45.3% id in 477 aa, and to Alteromonas haloplanktis na(+)-linked D-alanine glycine permease DAGA SW:DAGA_ALTHA (P30144) fasta scores: E(): 0, 36.5% id in 315 aa; Orthologue of E. coli yaaJ (YAAJ_ECOLI); Fasta hit to YAAJ_ECOLI (476 aa), 76% identity in 476 aa overlap.
  
   
 0.450
tnpA-3
Transposase for insertion sequence element is200; Involved in the transposition of the insertion sequence.
       0.447
STY1009
Putative ion:amino acid symporter; Similar to Alteromonas haloplanktis na DAGA SW:DAGA_ALTHA (P30144) fasta scores: E(): 0, 38.0% id in 329 aa; Paralogue of E. coli yaaJ (YAAJ_ECOLI); Fasta hit to YAAJ_ECOLI (476 aa), 30% identity in 434 aa overlap.
  
   
 0.437
STY3150
Possible lipoprotein; Fasta hit to YGDI_ECOLI (75 aa), 58% identity in 72 aa overlap; Orthologue of E. coli YGDR_ECOLI; Fasta hit to YGDR_ECOLI (72 aa), 90% identity in 72 aa overlap. Contains a possible N-terminal signal sequence.
  
     0.404
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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