STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY3206Similar to Escherichia coli hypothetical protein YqfB SW:YQFB_ECOLI (Q46828) (103 aa) fasta scores: E(): 0, 87.4% id in 103 aa; Belongs to the UPF0267 family. (103 aa)    
Predicted Functional Partners:
STY3519
Putative sialic acid transporter; Catalyzes the proton-dependent transport of sialic acid. Belongs to the major facilitator superfamily. Sialate:H(+) symporter (SHS) (TC 2.A.1.12) family.
  
   
 0.833
STY1175
Putative membrane protein; Fasta hit to YAHC_ECOLI (165 aa), 30% identity in 156 aa overlap; Orthologue of E. coli YCDZ_ECOLI; Fasta hit to YCDZ_ECOLI (179 aa), 84% identity in 179 aa overlap.
  
     0.729
dcuC
Similar to Escherichia coli C4-dicarboxylate anaerobic carrier dcuC SW:DCUC_ECOLI (Q47134) (461 aa) fasta scores: E(): 0, 93.0% id in 460 aa; Fasta hit to YHCL_ECOLI (455 aa), 36% identity in 447 aa overlap; Orthologue of E. coli DCUC_ECOLI; Fasta hit to DCUC_ECOLI (461 aa), 93% identity in 460 aa overlap.
  
     0.665
STY2116
Similar to Haemophilus influenzae hypothetical protein Hi1582/1581 hi1582/1581 SW:YECM_HAEIN (P44262; P44261) (191 aa) fasta scores: E(): 2.5e-21, 38.0% id in 184 aa; Orthologue of E. coli YECM_ECOLI; Fasta hit to YECM_ECOLI (188 aa), 85% identity in 188 aa overlap.
  
     0.657
STY1283
Conserved hypothetical protein; Similar to Klebsiella pneumoniae YchN protein ychN TR:Q9RLW1 (EMBL:L27824) (117 aa) fasta scores: E(): 0, 92.3% id in 117 aa; Orthologue of E. coli ychN (YCHN_ECOLI); Fasta hit to YCHN_ECOLI (117 aa), 92% identity in 117 aa overlap.
  
     0.636
STY4898
Putative membrane protein; Similar to Escherichia coli 14.1 kDa protein in dnat-bglj intergenic region SW:YJJB_ECOLI () (128 aa) fasta scores: E(): 0, 89.4% id in 104 aa. Contains transmembrane regions.
  
     0.631
menC
O-succinylbenzoate-CoA synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
  
     0.600
STY3746
Putative membrane protein; Similar to Escherichia coli hypothetical 13.0 kDa protein in udha-trma intergenic region yijD SW:YIJD_ECOLI (P27308) (119 aa) fasta scores: E(): 0, 89.9% id in 119 aa. Contains possible membrane spanning hydrophobic domains.
  
     0.533
ytfB
Similar to Escherichia coli hypothetical protein YtfB ytfB SW:YTFB_ECOLI (P39310) (212 aa) fasta scores: E(): 0, 85.8% id in 212 aa and to the carboxy terminal of Haemophilus influenzae opacity associated proteins OapA or HI0330 SW:OAPA_HAEIN (P44415) (431 aa) fasta scores: E(): 6.4e-05, 28.4% id in 148 aa.
  
     0.525
STY3207
6-phospho-beta-glucosidase; Highly similar to Escherichia coli 6-phospho-beta-glucosidase BglA SW:BGLA_ECOLI (Q46829) (479 aa) fasta scores: E(): 0, 94.8% id in 477 aa; Fasta hit to BGLB_ECOLI (470 aa), 52% identity in 475 aa overlap; Fasta hit to ASCB_ECOLI (474 aa), 51% identity in 477 aa overlap; Belongs to the glycosyl hydrolase 1 family.
       0.519
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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