STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY3404Possible drug efflux protein; Has been proposed to be a redox modulator. Belongs to the TerC family. (322 aa)    
Predicted Functional Partners:
STY3405
Probable membrane transport protein; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.
       0.468
STY3403
Possible oxidoreductase; Similar to Escherichia coli hypothetical protein YgjR SW:YGJR_ECOLI (P42599; P42600; P76661) (328 aa) fasta scores: E(): 0, 83.1% id in 326 aa and to Sus scrofa (Pig) dimeric dihydrodiol dehydrogenase Sus2dD TR:Q9TV69 (EMBL:AB021929) (335 aa) fasta scores: E(): 2.9e-15, 25.4% id in 346 aa.
       0.439
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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