Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| STY0464 | STY0839 | gene:17584486 | gene:17584843 | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Molybdopterin converting factor, subunit 1; Orthologue of E. coli moaD (MOAD_ECOLI); Fasta hit to MOAD_ECOLI (81 aa), 85% identity in 81 aa overlap. | 0.561 |
| STY0464 | STY0884 | gene:17584486 | gene:17584881 | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Molybdopterin biosynthesis MoeB protein; Fasta hit to THIF_ECOLI (251 aa), 43% identity in 245 aa overlap; Orthologue of E. coli moeB (MOEB_ECOLI); Fasta hit to MOEB_ECOLI (249 aa), 89% identity in 249 aa overlap. | 0.491 |
| STY0464 | STY3721 | gene:17584486 | gene:17587581 | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Thiamine biosynthesis protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.718 |
| STY0464 | STY3723 | gene:17584486 | gene:17587583 | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Thiamine biosynthesis protein; Fasta hit to MOEB_ECOLI (249 aa), 45% identity in 245 aa overlap; Orthologue of E. coli thiF (THIF_ECOLI); Fasta hit to THIF_ECOLI (251 aa), 87% identity in 251 aa overlap. | 0.976 |
| STY0464 | STY3725 | gene:17584486 | gene:17587585 | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Thiamine biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.975 |
| STY0464 | STY3726 | gene:17584486 | gene:17587586 | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Thiamine biosynthesis protein; Orthologue of E. coli thiH (THIH_ECOLI); Fasta hit to THIH_ECOLI (377 aa), 90% identity in 375 aa overlap. | 0.710 |
| STY0464 | dxs | gene:17584486 | gene:17584483 | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 1-deoxyxylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.739 |
| STY0464 | thiD | gene:17584486 | gene:17586280 | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Phosphomethylpyrimidine kinase; Similar to Salmonella typhimurium LT2 phosphomethylpyrimidine kinase SW:THID_SALTY (P55882) (266 aa) fasta scores: E(): 0, 99.2% id in 266 aa; Orthologue of E. coli THID_ECOLI; Fasta hit to THID_ECOLI (266 aa), 91% identity in 266 aa overlap. | 0.539 |
| STY0464 | thiE | gene:17584486 | gene:17587582 | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.773 |
| STY0839 | STY0464 | gene:17584843 | gene:17584486 | Molybdopterin converting factor, subunit 1; Orthologue of E. coli moaD (MOAD_ECOLI); Fasta hit to MOAD_ECOLI (81 aa), 85% identity in 81 aa overlap. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.561 |
| STY0839 | STY0884 | gene:17584843 | gene:17584881 | Molybdopterin converting factor, subunit 1; Orthologue of E. coli moaD (MOAD_ECOLI); Fasta hit to MOAD_ECOLI (81 aa), 85% identity in 81 aa overlap. | Molybdopterin biosynthesis MoeB protein; Fasta hit to THIF_ECOLI (251 aa), 43% identity in 245 aa overlap; Orthologue of E. coli moeB (MOEB_ECOLI); Fasta hit to MOEB_ECOLI (249 aa), 89% identity in 249 aa overlap. | 0.997 |
| STY0839 | STY3723 | gene:17584843 | gene:17587583 | Molybdopterin converting factor, subunit 1; Orthologue of E. coli moaD (MOAD_ECOLI); Fasta hit to MOAD_ECOLI (81 aa), 85% identity in 81 aa overlap. | Thiamine biosynthesis protein; Fasta hit to MOEB_ECOLI (249 aa), 45% identity in 245 aa overlap; Orthologue of E. coli thiF (THIF_ECOLI); Fasta hit to THIF_ECOLI (251 aa), 87% identity in 251 aa overlap. | 0.614 |
| STY0839 | STY3725 | gene:17584843 | gene:17587585 | Molybdopterin converting factor, subunit 1; Orthologue of E. coli moaD (MOAD_ECOLI); Fasta hit to MOAD_ECOLI (81 aa), 85% identity in 81 aa overlap. | Thiamine biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.704 |
| STY0884 | STY0464 | gene:17584881 | gene:17584486 | Molybdopterin biosynthesis MoeB protein; Fasta hit to THIF_ECOLI (251 aa), 43% identity in 245 aa overlap; Orthologue of E. coli moeB (MOEB_ECOLI); Fasta hit to MOEB_ECOLI (249 aa), 89% identity in 249 aa overlap. | Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.491 |
| STY0884 | STY0839 | gene:17584881 | gene:17584843 | Molybdopterin biosynthesis MoeB protein; Fasta hit to THIF_ECOLI (251 aa), 43% identity in 245 aa overlap; Orthologue of E. coli moeB (MOEB_ECOLI); Fasta hit to MOEB_ECOLI (249 aa), 89% identity in 249 aa overlap. | Molybdopterin converting factor, subunit 1; Orthologue of E. coli moaD (MOAD_ECOLI); Fasta hit to MOAD_ECOLI (81 aa), 85% identity in 81 aa overlap. | 0.997 |
| STY0884 | STY3721 | gene:17584881 | gene:17587581 | Molybdopterin biosynthesis MoeB protein; Fasta hit to THIF_ECOLI (251 aa), 43% identity in 245 aa overlap; Orthologue of E. coli moeB (MOEB_ECOLI); Fasta hit to MOEB_ECOLI (249 aa), 89% identity in 249 aa overlap. | Thiamine biosynthesis protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.646 |
| STY0884 | STY3725 | gene:17584881 | gene:17587585 | Molybdopterin biosynthesis MoeB protein; Fasta hit to THIF_ECOLI (251 aa), 43% identity in 245 aa overlap; Orthologue of E. coli moeB (MOEB_ECOLI); Fasta hit to MOEB_ECOLI (249 aa), 89% identity in 249 aa overlap. | Thiamine biosynthesis protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.854 |
| STY0884 | STY3726 | gene:17584881 | gene:17587586 | Molybdopterin biosynthesis MoeB protein; Fasta hit to THIF_ECOLI (251 aa), 43% identity in 245 aa overlap; Orthologue of E. coli moeB (MOEB_ECOLI); Fasta hit to MOEB_ECOLI (249 aa), 89% identity in 249 aa overlap. | Thiamine biosynthesis protein; Orthologue of E. coli thiH (THIH_ECOLI); Fasta hit to THIH_ECOLI (377 aa), 90% identity in 375 aa overlap. | 0.576 |
| STY0884 | thiD | gene:17584881 | gene:17586280 | Molybdopterin biosynthesis MoeB protein; Fasta hit to THIF_ECOLI (251 aa), 43% identity in 245 aa overlap; Orthologue of E. coli moeB (MOEB_ECOLI); Fasta hit to MOEB_ECOLI (249 aa), 89% identity in 249 aa overlap. | Phosphomethylpyrimidine kinase; Similar to Salmonella typhimurium LT2 phosphomethylpyrimidine kinase SW:THID_SALTY (P55882) (266 aa) fasta scores: E(): 0, 99.2% id in 266 aa; Orthologue of E. coli THID_ECOLI; Fasta hit to THID_ECOLI (266 aa), 91% identity in 266 aa overlap. | 0.632 |
| STY0884 | thiE | gene:17584881 | gene:17587582 | Molybdopterin biosynthesis MoeB protein; Fasta hit to THIF_ECOLI (251 aa), 43% identity in 245 aa overlap; Orthologue of E. coli moeB (MOEB_ECOLI); Fasta hit to MOEB_ECOLI (249 aa), 89% identity in 249 aa overlap. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.640 |
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