STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Cooccurrence
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[Homology]
Score
STY3796Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Responsible for energy coupling to the transport system (By similarity). (511 aa)    
Predicted Functional Partners:
STY3795
Putative ABC transporter permease protein; Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Probably responsible for the translocation of the substrate across the membrane (By similarity).
 0.999
STY3794
Putative ABC transporter, membrane component; Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Probably responsible for the translocation of the substrate across the membrane (By similarity).
 0.998
STY3793
Putative ABC transport protein, solute-binding component; Part of the ABC transporter complex LsrABCD involved in autoinducer 2 (AI-2) import. Binds AI-2 and delivers it to the LsrC and LsrD permeases (By similarity).
 
 0.994
STY3895
High affinity ribose transport protein; Fasta hit to ALSC_ECOLI (326 aa), 40% identity in 314 aa overlap; Fasta hit to YPHD_ECOLI (332 aa), 39% identity in 314 aa overlap; Fasta hit to XYLH_ECOLI (393 aa), 36% identity in 357 aa overlap; Fasta hit to YTFT_ECOLI (341 aa), 37% identity in 321 aa overlap; Fasta hit to ARAH_ECOLI (329 aa), 37% identity in 311 aa overlap; Fasta hit to YJFF_ECOLI (323 aa), 39% identity in 286 aa overlap; Fasta hit to YDEY_ECOLI (342 aa), 34% identity in 300 aa overlap; Fasta hit to MGLC_ECOLI (336 aa), 36% identity in 334 aa overlap; Orthologue of E. coli rb [...]
 
 0.926
STY3897
High affinity ribose transport protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.905
STY3894
D-ribose-binding periplasmic protein; Part of the ABC transporter complex RbsABC involved in ribose import. Binds ribose.
 
 0.904
STY3792
Putative aldolase; Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the transfer of an acetyl moiety from 3-hydroxy-5- phosphonooxypentane-2,4-dione to CoA to form glycerone phosphate and acetyl-CoA; Belongs to the DeoC/FbaB aldolase family.
 
  
 0.863
STY2421
Similar to Salmonella typhimurium LT2 galactoside transport system permease protein mglc. galactoside transport system permease protein mglc SW:MGLC_SALTY (Q56036) (302 aa) fasta scores: E(): 0, 99.7% id in 291 aa; Fasta hit to YDEZ_ECOLI (330 aa), 31% identity in 320 aa overlap; Fasta hit to ALSC_ECOLI (326 aa), 36% identity in 332 aa overlap; Fasta hit to YPHD_ECOLI (332 aa), 33% identity in 329 aa overlap; Fasta hit to XYLH_ECOLI (393 aa), 31% identity in 370 aa overlap; Fasta hit to ARAH_ECOLI (329 aa), 31% identity in 325 aa overlap; Fasta hit to YJFF_ECOLI (323 aa), 33% identity [...]
  
 0.862
STY2424
Similar to Salmonella typhimurium D-galactose-binding periplasmic protein precursor mglB SW:DGAL_SALTY (P23905) (332 aa) fasta scores: E(): 0, 99.1% id in 332 aa; Orthologue of E. coli mglB (DGAL_ECOLI); Fasta hit to DGAL_ECOLI (332 aa), 93% identity in 332 aa overlap.
 
 
 0.838
STY3797
Putative regulatory protein; In the absence of autoinducer 2 (AI-2), represses transcription of the lsrACDBFGE operon and its own transcription. In the presence of AI-2, LsrR is inactivated by binding phospho-AI-2, leading to the transcription of the lsr genes (By similarity).
 
  
 0.838
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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