node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
STY0118 | STY0120 | gene:17584160 | gene:17584162 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | L-ribulokinase; Orthologue of E. coli araB (KIRI_ECOLI); Fasta hit to KIRI_ECOLI (565 aa), 90% identity in 567 aa overlap. | 0.998 |
STY0118 | STY3826 | gene:17584160 | gene:17587688 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.844 |
STY0118 | STY4060 | gene:17584160 | gene:17587903 | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | RNase PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.736 |
STY0120 | STY0118 | gene:17584162 | gene:17584160 | L-ribulokinase; Orthologue of E. coli araB (KIRI_ECOLI); Fasta hit to KIRI_ECOLI (565 aa), 90% identity in 567 aa overlap. | L-ribulose-5-phosphate 4-epimerase; Involved in the degradation of L-arabinose. Catalyzes the interconversion of L-ribulose 5-phosphate (LRu5P) and D-xylulose 5- phosphate (D-Xu5P) via a retroaldol/aldol mechanism (carbon-carbon bond cleavage analogous to a class II aldolase reaction). | 0.998 |
STY0120 | STY3826 | gene:17584162 | gene:17587688 | L-ribulokinase; Orthologue of E. coli araB (KIRI_ECOLI); Fasta hit to KIRI_ECOLI (565 aa), 90% identity in 567 aa overlap. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.865 |
STY0120 | STY4060 | gene:17584162 | gene:17587903 | L-ribulokinase; Orthologue of E. coli araB (KIRI_ECOLI); Fasta hit to KIRI_ECOLI (565 aa), 90% identity in 567 aa overlap. | RNase PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. | 0.642 |
STY3116 | STY3826 | gene:17587000 | gene:17587688 | L-fuculose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.738 |
STY3116 | STY3827 | gene:17587000 | gene:17587689 | L-fuculose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | L-rhamnose isomerase; Orthologue of E. coli rhaA (RHAA_ECOLI); Fasta hit to RHAA_ECOLI (419 aa), 94% identity in 418 aa overlap. | 0.798 |
STY3116 | STY3831 | gene:17587000 | gene:17587692 | L-fuculose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.537 |
STY3823 | STY3824 | gene:17587685 | gene:17587686 | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | L-rhamnose operon transcriptional activator; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.915 |
STY3823 | STY3825 | gene:17587685 | gene:17587687 | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | L-rhamnose operon regulatory protein; Activates expression of the rhaBAD and rhaT operons. | 0.860 |
STY3823 | STY3826 | gene:17587685 | gene:17587688 | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.902 |
STY3823 | STY3827 | gene:17587685 | gene:17587689 | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | L-rhamnose isomerase; Orthologue of E. coli rhaA (RHAA_ECOLI); Fasta hit to RHAA_ECOLI (419 aa), 94% identity in 418 aa overlap. | 0.896 |
STY3823 | STY3831 | gene:17587685 | gene:17587692 | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | Conserved hypothetical protein; Involved in the anomeric conversion of L-rhamnose. | 0.698 |
STY3824 | STY3823 | gene:17587686 | gene:17587685 | L-rhamnose operon transcriptional activator; Activates expression of the rhaSR operon in response to L- rhamnose. | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.915 |
STY3824 | STY3825 | gene:17587686 | gene:17587687 | L-rhamnose operon transcriptional activator; Activates expression of the rhaSR operon in response to L- rhamnose. | L-rhamnose operon regulatory protein; Activates expression of the rhaBAD and rhaT operons. | 0.736 |
STY3824 | STY3826 | gene:17587686 | gene:17587688 | L-rhamnose operon transcriptional activator; Activates expression of the rhaSR operon in response to L- rhamnose. | Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family. | 0.939 |
STY3824 | STY3827 | gene:17587686 | gene:17587689 | L-rhamnose operon transcriptional activator; Activates expression of the rhaSR operon in response to L- rhamnose. | L-rhamnose isomerase; Orthologue of E. coli rhaA (RHAA_ECOLI); Fasta hit to RHAA_ECOLI (419 aa), 94% identity in 418 aa overlap. | 0.651 |
STY3825 | STY3823 | gene:17587687 | gene:17587685 | L-rhamnose operon regulatory protein; Activates expression of the rhaBAD and rhaT operons. | L rhamnose-proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family. | 0.860 |
STY3825 | STY3824 | gene:17587687 | gene:17587686 | L-rhamnose operon regulatory protein; Activates expression of the rhaBAD and rhaT operons. | L-rhamnose operon transcriptional activator; Activates expression of the rhaSR operon in response to L- rhamnose. | 0.736 |