Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| STY1962 | STY2121 | gene:17585880 | gene:17586028 | Putative membrane protein; Orthologue of E. coli P76263; Fasta hit to P76263 (152 aa), 89% identity in 152 aa overlap. | Flagellar protein FlhE precursor; Not essential for flagellar formation and function. | 0.729 |
| STY1962 | STY4281 | gene:17585880 | gene:17588112 | Putative membrane protein; Orthologue of E. coli P76263; Fasta hit to P76263 (152 aa), 89% identity in 152 aa overlap. | MalT regulatory protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. | 0.543 |
| STY1962 | STY4428 | gene:17585880 | gene:17588260 | Putative membrane protein; Orthologue of E. coli P76263; Fasta hit to P76263 (152 aa), 89% identity in 152 aa overlap. | Similar to Salmonella typhimurium maltose operon periplasmic protein precursor MalM SW:MALM_SALTY (P26478) (305 aa) fasta scores: E(): 0, 99.3% id in 305 aa and to Escherichia coli maltose operon periplasmic protein precursor MalM SW:MALM_ECOLI (P03841) (306 aa) fasta scores: E(): 0, 90.8% id in 306 aa. Contains N-terminal signal sequence, probable secreted protein. | 0.400 |
| STY2121 | STY1962 | gene:17586028 | gene:17585880 | Flagellar protein FlhE precursor; Not essential for flagellar formation and function. | Putative membrane protein; Orthologue of E. coli P76263; Fasta hit to P76263 (152 aa), 89% identity in 152 aa overlap. | 0.729 |
| STY2121 | STY4281 | gene:17586028 | gene:17588112 | Flagellar protein FlhE precursor; Not essential for flagellar formation and function. | MalT regulatory protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. | 0.580 |
| STY2121 | STY4427 | gene:17586028 | gene:17588259 | Flagellar protein FlhE precursor; Not essential for flagellar formation and function. | Maltoporin precursor; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family. | 0.411 |
| STY2121 | STY4428 | gene:17586028 | gene:17588260 | Flagellar protein FlhE precursor; Not essential for flagellar formation and function. | Similar to Salmonella typhimurium maltose operon periplasmic protein precursor MalM SW:MALM_SALTY (P26478) (305 aa) fasta scores: E(): 0, 99.3% id in 305 aa and to Escherichia coli maltose operon periplasmic protein precursor MalM SW:MALM_ECOLI (P03841) (306 aa) fasta scores: E(): 0, 90.8% id in 306 aa. Contains N-terminal signal sequence, probable secreted protein. | 0.431 |
| STY2121 | ybiP | gene:17586028 | gene:17584872 | Flagellar protein FlhE precursor; Not essential for flagellar formation and function. | Putative membrane protein; Similar to Escherichia coli hypothetical 59.7 kDa protein in ompx-moeb intergenic region ybiP SW:YBIP_ECOLI (P75785) (527 aa) fasta scores: E(): 0, 83.8% id in 526 aa; Orthologue of E. coli YBIP_ECOLI; Fasta hit to YBIP_ECOLI (527 aa), 84% identity in 526 aa overlap. | 0.647 |
| STY4134 | STY4281 | gene:17587976 | gene:17588112 | Alpha-amylase; Orthologue of E. coli malS (AMY1_ECOLI); Fasta hit to AMY1_ECOLI (676 aa), 82% identity in 676 aa overlap. Contains a probable N-terminal signal sequence. | MalT regulatory protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. | 0.597 |
| STY4134 | STY4423 | gene:17587976 | gene:17588255 | Alpha-amylase; Orthologue of E. coli malS (AMY1_ECOLI); Fasta hit to AMY1_ECOLI (676 aa), 82% identity in 676 aa overlap. Contains a probable N-terminal signal sequence. | Maltose transport inner membrane protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane. | 0.792 |
| STY4134 | STY4424 | gene:17587976 | gene:17588256 | Alpha-amylase; Orthologue of E. coli malS (AMY1_ECOLI); Fasta hit to AMY1_ECOLI (676 aa), 82% identity in 676 aa overlap. Contains a probable N-terminal signal sequence. | Maltose transport inner membrane protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane. | 0.817 |
| STY4134 | STY4425 | gene:17587976 | gene:17588257 | Alpha-amylase; Orthologue of E. coli malS (AMY1_ECOLI); Fasta hit to AMY1_ECOLI (676 aa), 82% identity in 676 aa overlap. Contains a probable N-terminal signal sequence. | Periplasmic maltose-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family. | 0.844 |
| STY4134 | STY4426 | gene:17587976 | gene:17588258 | Alpha-amylase; Orthologue of E. coli malS (AMY1_ECOLI); Fasta hit to AMY1_ECOLI (676 aa), 82% identity in 676 aa overlap. Contains a probable N-terminal signal sequence. | Maltose/maltodextrin transport ATP-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family. | 0.550 |
| STY4134 | STY4427 | gene:17587976 | gene:17588259 | Alpha-amylase; Orthologue of E. coli malS (AMY1_ECOLI); Fasta hit to AMY1_ECOLI (676 aa), 82% identity in 676 aa overlap. Contains a probable N-terminal signal sequence. | Maltoporin precursor; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family. | 0.717 |
| STY4134 | STY4428 | gene:17587976 | gene:17588260 | Alpha-amylase; Orthologue of E. coli malS (AMY1_ECOLI); Fasta hit to AMY1_ECOLI (676 aa), 82% identity in 676 aa overlap. Contains a probable N-terminal signal sequence. | Similar to Salmonella typhimurium maltose operon periplasmic protein precursor MalM SW:MALM_SALTY (P26478) (305 aa) fasta scores: E(): 0, 99.3% id in 305 aa and to Escherichia coli maltose operon periplasmic protein precursor MalM SW:MALM_ECOLI (P03841) (306 aa) fasta scores: E(): 0, 90.8% id in 306 aa. Contains N-terminal signal sequence, probable secreted protein. | 0.742 |
| STY4281 | STY1962 | gene:17588112 | gene:17585880 | MalT regulatory protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. | Putative membrane protein; Orthologue of E. coli P76263; Fasta hit to P76263 (152 aa), 89% identity in 152 aa overlap. | 0.543 |
| STY4281 | STY2121 | gene:17588112 | gene:17586028 | MalT regulatory protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. | Flagellar protein FlhE precursor; Not essential for flagellar formation and function. | 0.580 |
| STY4281 | STY4134 | gene:17588112 | gene:17587976 | MalT regulatory protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. | Alpha-amylase; Orthologue of E. coli malS (AMY1_ECOLI); Fasta hit to AMY1_ECOLI (676 aa), 82% identity in 676 aa overlap. Contains a probable N-terminal signal sequence. | 0.597 |
| STY4281 | STY4423 | gene:17588112 | gene:17588255 | MalT regulatory protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. | Maltose transport inner membrane protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane. | 0.583 |
| STY4281 | STY4424 | gene:17588112 | gene:17588256 | MalT regulatory protein; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box. | Maltose transport inner membrane protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Probably responsible for the translocation of the substrate across the membrane. | 0.580 |
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