STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY4471Sodium:solute symporter family protein; Transports acetate; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (549 aa)    
Predicted Functional Partners:
STY4472
Putative membrane protein; Similar to Escherichia coli hypothetical 11.7 kDa protein in soxR-acs intergenic region YjcH SW:YJCH_ECOLI (P32706) (104 aa) fasta scores: E(): 0, 89.3% id in 103 aa, and to Pseudomonas aeruginosa conserved hypothetical protein PA3235 TR:AAG06623 (EMBL:AE004746) (103 aa) fasta scores: E(): 2.7e-20, 59.8% id in 102 aa. Predicted hydrophobic membrane spanning domains, integral membrane protein.
 
  
 0.998
acs
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. Acs undergoes a two-step reaction. In the first half reaction, Acs combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.
  
  
 0.852
STY0189
Conserved hypothetical protein; Orthologue of E. coli yacC (YACC_ECOLI); Fasta hit to YACC_ECOLI (115 aa), 96% identity in 115 aa overlap.
      
 0.687
prpE
PrpE protein; Similar to Salmonella typhimurium prpe protein SW:PRPE_SALTY () (640 aa) fasta scores: E(): 0, 98.6% id in 621 aa, and to Escherichia coli PrpE protein prpE SW:PRPE_ECOLI (P77495) (628 aa) fasta scores: E(): 0, 89.5% id in 628 aa; Fasta hit to ACSA_ECOLI (652 aa), 38% identity in 638 aa overlap; Orthologue of E. coli PRPE_ECOLI; Fasta hit to PRPE_ECOLI (628 aa), 90% identity in 628 aa overlap.
  
  
 0.597
yacK
Possible multicopper oxidase precursor; Probably involved in periplasmic detoxification of copper by oxidizing Cu(+) to Cu(2+) and thus preventing its uptake into the cytoplasm. Possesses phenoloxidase and ferroxidase activities and might be involved in the production of polyphenolic compounds and the prevention of oxidative damage in the periplasm (By similarity).
      
 0.534
STY3577
Large (alpha) subunit of the fatty acid-oxidizing multienzyme complex; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
  
 0.526
cueR
Copper efflux regulator; Regulates the transcription of the copA and cueO genes. It detects cytoplasmic copper stress and activates transcription in response to increasing copper concentrations (By similarity).
      
 0.512
STY1170
Putative oxidoreductase; Similar to Rhizobium meliloti myo-inositol 2-dehydrogenase idha SW:MI2D_RHIME (O68965) fasta scores: E(): 1.4e-14, 26.8% id in 370 aa; Orthologue of E. coli yjhC (YJHC_ECOLI); Fasta hit to YJHC_ECOLI (372 aa), 62% identity in 366 aa overlap.
      
 0.501
STY2620
Putative fatty acid oxidation complex alpha subunit; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.453
STY0354
Possible acyl-CoA dehydrogenase; Catalyzes the dehydrogenation of acyl-coenzymes A (acyl-CoAs) to 2-enoyl-CoAs, the first step of the beta-oxidation cycle of fatty acid degradation. Is required for the utilization of medium- and long- chain fatty acids as sole carbon sources for growth. Is needed for bacterial survival during carbone-source starvation.
   
  
 0.436
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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