STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vexBVi polysaccharide export inner-membrane protein (ABC-2 type transporter); May form an ATP-driven Vi polysaccharide export apparatus, in association with the VexA, VexC and VexD proteins; Belongs to the ABC-2 integral membrane protein family. (264 aa)    
Predicted Functional Partners:
vexD
Vi polysaccharide export inner-membrane protein; May form an ATP-driven capsule polysaccharide export apparatus, in association with the VexA, VexB and VexC proteins; Belongs to the BexC/CtrB/KpsE family.
 
 
 0.999
vexC
Vi polysaccharide export ATP-binding protein; May form an ATP-driven Vi polysaccharide export apparatus, in association with the VexA, VexB and VexD proteins; Belongs to the ABC transporter superfamily.
 
 0.999
vexA
Vi polysaccharide export protein; May form an ATP-driven capsule polysaccharide export apparatus, in association with the VexB, VexC and VexD proteins. May function as a membrane anchor for the polysaccharide. Possible porin properties; Belongs to the BexD/CtrA/VexA family.
 
  
 0.994
vexE
Vi polysaccharide export protein; May be involved in translocation of the Vi antigen.
     
 0.926
tviE
Vi polysaccharide biosynthesis protein TviE, Glycosyl transferases group 1; Similar to Salmonella typhi Vi polysaccharide biosynthesis protein VipC or TviE SW:VIPC_SALTI (Q04975) (578 aa) fasta scores: E(): 0, 99.5% id in 578 aa.
  
  
 0.925
STY0764
Putative polysaccharide export ABC transporter ATP-binding protein; Similar to Mycobacterium tuberculosis hypothetical 30.0 kDa protein cy13d12.15 rv3781 or mtcy13d12.15 TR:P72047 (EMBL:Z80343) (273 aa) fasta scores: E(): 0, 43.8% id in 233 aa, and to Yersinia enterocolitica O-antigen export system ATP-binding protein RfbE rfbE SW:RFBE_YEREN (Q56903) (239 aa) fasta scores: E(): 0, 45.3% id in 225 aa.
  
 
 0.910
tviD
Vi polysaccharide biosynthesis protein; May be required for maturation of the Vi polysaccharide.
  
  
 0.907
tviC
Similar to Salmonella typhi Vi polysaccharide biosynthesis protein VipB or TviC SW:VIPB_SALTI (Q04973) (348 aa) fasta scores: E(): 0, 100.0% id in 348 aa, and to Pseudomonas aeruginosa WbpP TR:Q9RHD6 (EMBL:AF035937) (341 aa) fasta scores: E(): 0, 66.6% id in 338 aa; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
  
 0.854
tviB
Similar to Salmonella typhi Vi polysaccharide biosynthesis protein VipA or TviB SW:VIPA_SALTI (Q04972) (425 aa) fasta scores: E(): 0, 99.8% id in 425 aa, and to Pseudomonas aeruginosa WbpO TR:Q9RHD7 (EMBL:AF035937) (422 aa) fasta scores: E(): 0, 66.8% id in 422 aa; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
  
 0.821
wza
Putative polysaccharide export protein; Probably involved in the export of the extracellular polysaccharide colanic acid from the cell to medium.
 
  
 0.740
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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