STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY4805Arginine deiminase; Similar to Pseudomonas aeruginosa arginine deiminase SW:ARCA_PSEAE (P13981) (417 aa) fasta scores: E(): 0, 46.8% id in 408 aa, and to Rhizobium etli arginine deiminase TR:O31017 (EMBL:AF025543) (409 aa) fasta scores: E(): 0, 47.3% id in 402 aa. (406 aa)    
Predicted Functional Partners:
STY4803
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
 
 
 0.994
STY4804
Carbamate kinase; Similar to Pseudomonas aeruginosa carbamate kinase SW:ARCC_PSEAE (P13982) (310 aa) fasta scores: E(): 0, 54.6% id in 306 aa, and to Synechocystis sp carbamate kinase SW:ARCC_SYNY3 (P74733) (308 aa) fasta scores: E(): 0, 53.5% id in 301 aa.
 
  
 0.993
STY4807
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
 
 
 0.989
arcC
Carbamate kinase; Similar to Escherichia coli carbamate kinase arcC SW:ARCC_ECOLI (P37306; P77419) (297 aa) fasta scores: E(): 0, 86.9% id in 297 aa, and to Pseudomonas aeruginosa carbamate kinase arcC SW:ARCC_PSEAE (P13982) (310 aa) fasta scores: E(): 0, 52.7% id in 296 aa; Fasta hit to ARCM_ECOLI (316 aa), 40% identity in 317 aa overlap; Fasta hit to ARCL_ECOLI (310 aa), 40% identity in 315 aa overlap; Orthologue of E. coli ybcF (ARCC_ECOLI); Fasta hit to ARCC_ECOLI (297 aa), 87% identity in 297 aa overlap.
 
  
 0.973
STY3750
Argininosuccinate lyase; Orthologue of E. coli argH (ARLY_ECOLI); Fasta hit to ARLY_ECOLI (457 aa), 95% identity in 456 aa overlap.
     
 0.924
STY3470
Argininosuccinate synthetase; Orthologue of E. coli argG (ASSY_ECOLI); Fasta hit to ASSY_ECOLI (446 aa), 96% identity in 446 aa overlap; Belongs to the argininosuccinate synthase family. Type 2 subfamily.
     
 0.914
STY3753
Acetylornithine deacetylase; Displays a broad specificity and can also deacylate substrates such as acetylarginine, acetylhistidine or acetylglutamate semialdehyde.
  
 
 0.908
STY4802
Putative membrane protein; Similar to Borrelia burgdorferi conserved hypothetical integral membrane protein BB0843 TR:O51783 (EMBL:AE001183) (482 aa) fasta scores: E(): 0, 40.5% id in 467 aa and to Borrelia afzelii hypothetical protein TR:O51898 (EMBL:AF008219) (473 aa) fasta scores: E(): 0, 39.8% id in 467 aa.
 
   
 0.891
adi
Arginine decarboxylase; Similar to Escherichia coli biodegradative arginine decarboxylase SW:ADI_ECOLI (P28629) (755 aa) fasta scores: E(): 0, 93.1% id in 755 aa, and to Escherichia coli lysine decarboxylase, constitutive SW:DCLZ_ECOLI (P52095) (713 aa) fasta scores: E(): 0, 36.2% id in 737 aa.
     
 0.865
astA
Arginine N-succinyltransferase; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine.
     
 0.856
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.