STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY1449Conserved hypothetical protein; Orthologue of E. coli yjhM (SGCQ_ECOLI); Fasta hit to SGCQ_ECOLI (268 aa), 93% identity in 268 aa overlap. (268 aa)    
Predicted Functional Partners:
STY1450
Putative phosphotransferase enzyme; Fasta hit to PTKC_ECOLI (451 aa), 42% identity in 431 aa overlap; Orthologue of E. coli yjhN (SGCC_ECOLI); Fasta hit to SGCC_ECOLI (437 aa), 95% identity in 437 aa overlap.
 
    0.886
STY1452
Conserved hypothetical protein; Fasta hit to P77585 (345 aa), 32% identity in 349 aa overlap; Orthologue of E. coli yjhO (SGCX_ECOLI); Fasta hit to SGCX_ECOLI (383 aa), 84% identity in 372 aa overlap.
 
  
 0.861
STY1451
Putative phosphotransferase enzyme; Paralogue of E. coli gatB (PTKB_ECOLI); Fasta hit to PTKB_ECOLI (94 aa), 35% identity in 92 aa overlap.
 
     0.826
STY1446
Putative regulatory protein; Orthologue of E. coli yjhJ (SGCR_ECOLI); Fasta hit to SGCR_ECOLI (260 aa), 90% identity in 255 aa overlap.
 
  
 0.763
STY1448
Putative phosphotransferase enzyme; Fasta hit to PTXA_ECOLI (154 aa), 34% identity in 125 aa overlap; Fasta hit to PTYA_ECOLI (147 aa), 40% identity in 124 aa overlap; Orthologue of E. coli yjhL (SGCA_ECOLI); Fasta hit to SGCA_ECOLI (143 aa), 72% identity in 142 aa overlap.
  
  
 0.586
STY1447
Putative ribulose-5-phosphate 3-epimerase; Similar to Spinacia oleracea ribulose-phosphate 3-epimerase precursor rpE SW:RPE_SPIOL (Q43157) (285 aa) fasta scores: E(): 1.2e-16, 32.5% id in 209 aa; Fasta hit to RPE_ECOLI (225 aa), 31% identity in 204 aa overlap; Fasta hit to ALSE_ECOLI (231 aa), 32% identity in 217 aa overlap; Orthologue of E. coli yjhK (SGCE_ECOLI); Fasta hit to SGCE_ECOLI (210 aa), 66% identity in 210 aa overlap.
  
    0.567
STY3443
PTS system, galactitol-specific IIC component; Fasta hit to SGCC_ECOLI (437 aa), 43% identity in 432 aa overlap; Orthologue of E. coli gatC (PTKC_ECOLI); Fasta hit to PTKC_ECOLI (451 aa), 85% identity in 446 aa overlap. Contains possible membrane spanning hydrophobic domains.
 
    0.481
STY4000
Putative PTS system IIC component; Similar to Bacillus halodurans PTS system galactitol-specific enzyme IIC component gatC TR:Q9Z9U2 (EMBL:AB011837) (419 aa) fasta scores: E(): 0, 45.0% id in 422 aa, and to Escherichia coli PTS system, galactitol-specific IIC component SW:PTKC_ECOLI () (451 aa) fasta scores: E(): 0, 39.7% id in 443 aa; Fasta hit to SGCC_ECOLI (437 aa), 37% identity in 430 aa overlap.
 
    0.478
aac
Similar to Salmonella enteritidis aminoglycoside 6'-N-acetyltransferase aac TR:Q9R381 (EMBL:AF144881) (145 aa) fasta scores: E(): 0, 97.9% id in 145 aa, and to Enterobacter cloacae aminoglycosidase-6'-acetyltransferase aacA TR:Q03635 (EMBL:X55353) (144 aa) fasta scores: E(): 9.3e-33, 56.9% id in 144 aa.
       0.469
STY1453
Ribosomal-protein-serine acetyltransferase; Orthologue of E. coli rimL (RIML_ECOLI); Fasta hit to RIML_ECOLI (179 aa), 69% identity in 178 aa overlap.
       0.467
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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