STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY2882Putative bacteriophage late gene regulator; Similar to Bacteriophage P2 protein D SW:VPD_BPP2 (P10312) (387 aa) fasta scores: E(): 0, 55.7% id in 370 aa and to Bacteriophage 186 late control protein D SW:VPD_BP186 (P21679) (389 aa) fasta scores: E(): 0, 56.5% id in 368 aa. (366 aa)    
Predicted Functional Partners:
STY2884
Similar to Bacteriophage P2 essential tail protein T TR:O64314 (EMBL:AF063097) (815 aa) fasta scores: E(): 2.2e-18, 26.7% id in 883 aa and Bacteriophage 186 tail protein G TR:Q37848 (EMBL:U32222) (812 aa) fasta scores: E(): 5.2e-16, 25.9% id in 901 aa.
 
  
 0.987
STY2883
Similar to e.g. Bacteriophage P2 essential tail protein U TR:O64315 (EMBL:AF063097) (159 aa) fasta scores: E(): 3e-27, 46.5% id in 157 aa and Bacteriophage 186 protein F TR:O80317 (EMBL:U32222) (161 aa) fasta scores: E(): 9.2e-29, 49.1% id in 159 aa.
 
  
 0.981
STY4615
Similar to Bacteriophage P2 baseplate assembly protein V SW:VPV_BPP2 (P31340) (211 aa) fasta scores: E(): 2.4e-22, 41.9% id in 210 aa Bacteriophage 186 Orf32 TR:O80314 (EMBL:U32222) (213 aa) fasta scores: E(): 1.2e-23, 45.3% id in 201 aa.
 
  
 0.978
STY4605
Putative phage tail protein; Similar to Bacteriophage P2 complete genome E, essential tail protein TR:O64313 (EMBL:AF063097) (91 aa) fasta scores: E(): 3.3e-12, 44.8% id in 87 aa.
 
    0.977
STY3674
Similar to Bacteriophage 186 capsid portal protein W TR:Q37851 (EMBL:U32222) (340 aa) fasta scores: E(): 0, 62.0% id in 342 aa and to Bacteriophage P2 presumed portal vertex protein Q SW:VPQ_BPP2 (P25480) (344 aa) fasta scores: E(): 0, 61.7% id in 342 aa.
  
    0.976
STY4623
Similar to Bacteriophage P2 head completion/stabilization protein L SW:VPL_BPP2 (P25475) (169 aa) fasta scores: E(): 4.7e-22, 40.4% id in 151 aa.
 
    0.976
STY3688
Similar to Bacteriophage P2 baseplate assembly protein W SW:VPW_BPP2 (P51768) (115 aa) fasta scores: E(): 2.4e-22, 55.6% id in 108 aa, and to Bacteriophage 186 protein M TR:O80315 (EMBL:U32222) (115 aa) fasta scores: E(): 4.5e-22, 57.8% id in 109 aa.
 
 
 0.959
STY4614
Similar to Bacteriophage P2 baseplate assembly protein W SW:VPW_BPP2 (P51768) (115 aa) fasta scores: E(): 1.1e-22, 56.5% id in 108 aa and Bacteriophage 186 protein M TR:O80315 (EMBL:U32222) (115 aa) fasta scores: E(): 3.6e-23, 61.5% id in 109 aa.
 
 
 0.959
STY3689
Similar to Bacteriophage P2 baseplate assembly protein J SW:VPJ_BPP2 (P51767) (302 aa) fasta scores: E(): 0, 64.9% id in 302 aa, and to Bacteriophage 186 p2 j homolog L TR:Q37840 (EMBL:U32222) (302 aa) fasta scores: E(): 0, 63.2% id in 302 aa.
 
  
 0.950
STY4613
Similar to Bacteriophage P2 baseplate assembly protein J SW:VPJ_BPP2 (P51767) (302 aa) fasta scores: E(): 0, 62.9% id in 302 aa, and to Bacteriophage 186 TR:Q37840 (EMBL:U32222) (302 aa) fasta scores: E(): 0, 62.6% id in 302 aa.
 
  
 0.950
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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