STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY4572Hypothetical protein; No significant database hits. (139 aa)    
Predicted Functional Partners:
STY4573
Hypothetical protein; Weakly similar in parts to Helicobacter pylori J99 DNA transfer protein virb4_2 TR:Q9ZKL8 (EMBL:AE001521) (475 aa) fasta scores: E(): 0.28, 18.6% id in 354 aa.
     0.994
STY4568
Possible exported protein; No significant database hits. Contains a possible N-terminal signal sequence.
 
     0.949
STY4569
Hypothetical protein.
 
     0.949
STY4570
Putative exported protein; No significant database hits. Contains a possible N-terminal signal sequence.
 
     0.949
STY4571
Putative lipoprotein; No significant database hits. Contains a possible N-terminal signal sequence. Putative N-terminal lipoprotein attachment site.
 
     0.949
STY4562
Hypothetical protein; Similar to Salmonella typhi plasmid R27 hypothetical protein TraG TR:Q9L5M3 (EMBL:AF250878) (694 aa) fasta scores: E(): 9e-18, 25.9% id in 630 aa. Contains a hydrophobic region towards the N-terminus.
 
  
 0.855
STY4564
Hypothetical protein; No significant database hits.
 
     0.854
STY4577
Hypothetical protein; No significant database hits.
 
 
   0.852
STY4576
Hypothetical protein.
 
     0.848
STY4579
Putative membrane protein; No significant database hits. Contains possible membrane spanning hydrophobic domains.
 
     0.845
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.