STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY4622Similar to Bacteriophage P2 tail protein X SW:VPX_BPP2 (P51772) (67 aa) fasta scores: E(): 8.2e-15, 61.2% id in 67 aa bacteriophage phi CTX protein TR:Q9ZXL9 (EMBL:AB008550) (69 aa) fasta scores: E(): 1.5e-15, 66.7% id in 66 aa. (67 aa)    
Predicted Functional Partners:
STY4623
Similar to Bacteriophage P2 head completion/stabilization protein L SW:VPL_BPP2 (P25475) (169 aa) fasta scores: E(): 4.7e-22, 40.4% id in 151 aa.
 
    0.975
STY4615
Similar to Bacteriophage P2 baseplate assembly protein V SW:VPV_BPP2 (P31340) (211 aa) fasta scores: E(): 2.4e-22, 41.9% id in 210 aa Bacteriophage 186 Orf32 TR:O80314 (EMBL:U32222) (213 aa) fasta scores: E(): 1.2e-23, 45.3% id in 201 aa.
 
  
 0.952
STY4625
Similar to Bacteriophage P2 major capsid protein precursor N SW:VPN_BPP2 (P25477) (357 aa) fasta scores: E(): 0, 59.6% id in 349 aa and to Bacteriophage 186 major capsid protein T TR:O80304 (EMBL:U32222) (355 aa) fasta scores: E(): 0, 60.0% id in 355 aa.
 
  
 0.951
STY4614
Similar to Bacteriophage P2 baseplate assembly protein W SW:VPW_BPP2 (P51768) (115 aa) fasta scores: E(): 1.1e-22, 56.5% id in 108 aa and Bacteriophage 186 protein M TR:O80315 (EMBL:U32222) (115 aa) fasta scores: E(): 3.6e-23, 61.5% id in 109 aa.
 
   0.948
STY4624
Similar to Bacteriophage P2 terminase, endonuclease subunit M SW:VPM_BPP2 (P25476) (247 aa) fasta scores: E(): 2.3e-32, 48.1% id in 212 aa and to Bacteriophage 186 protein R TR:O80305 (EMBL:U32222) (249 aa) fasta scores: E(): 2e-32, 48.3% id in 211 aa.
 
    0.948
STY4626
Putative capsid protein; Similar to Bacteriophage P2 presumed capsid scaffolding protein O SW:VPO_BPP2 (P25478) (284 aa) fasta scores: E(): 0, 45.0% id in 280 aa.
 
    0.948
STY4617
Similar to Bacteriophage P2 tail completion protein R SW:VPR_BPP2 (P36933) (155 aa) fasta scores: E(): 1.2e-21, 50.7% id in 134 aa and to Bacteriophage 186 protein N TR:O80312 (EMBL:U32222) (155 aa) fasta scores: E(): 3.5e-20, 48.6% id in 142 aa.
 
    0.944
STY4612
Similar to Bacteriophage P2 tail protein I SW:VPI_BPP2 (P26701) (176 aa) fasta scores: E(): 0, 57.6% id in 170 aa, and to Bacteriophage 186 orf38 TR:Q37841 (EMBL:U32222) (176 aa) fasta scores: E(): 0, 57.6% id in 170 aa.
 
 
 0.943
STY4613
Similar to Bacteriophage P2 baseplate assembly protein J SW:VPJ_BPP2 (P51767) (302 aa) fasta scores: E(): 0, 62.9% id in 302 aa, and to Bacteriophage 186 TR:Q37840 (EMBL:U32222) (302 aa) fasta scores: E(): 0, 62.6% id in 302 aa.
 
 
 0.943
STY4616
Similar to Bacteriophage P2 tail completion protein S SW:VPS_BPP2 (P36934) (150 aa) fasta scores: E(): 3.7e-17, 38.6% id in 145 aa and to Bacteriophage 186 protein O TR:O80313 (EMBL:U32222) (149 aa) fasta scores: E(): 8.4e-23, 47.6% id in 147 aa.
 
    0.942
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.