STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STY4676Hypothetical protein; No database matches. (260 aa)    
Predicted Functional Partners:
STY4675
Hypothetical protein; No database matches.
       0.529
STY2603
Putative transmembrane transporter; Fasta hit to YHHS_ECOLI (419 aa), 42% identity in 372 aa overlap; Orthologue of E. coli P77549; Fasta hit to P77549 (392 aa), 88% identity in 392 aa overlap; Shows weak similarity to many transporters e.g. Erwinia chrysanthemi sugar efflux transporter sotA SW:SOTA_ERWCH (Q9S3K0) (393 aa) fasta scores: E(): 1.6e-08, 25.7% id in 409 aa overlap. Contains hydrophobic, probable membrane-spanning regions.
   
    0.461
STY2954
PTS system, glucitol/sorbitol-specific IIBC component; Orthologue of E. coli srlE (PTHB_ECOLI); Fasta hit to PTHB_ECOLI (319 aa), 93% identity in 323 aa overlap.
   
  
 0.435
sgaH
Putative hexulose-6-phosphate synthase; Catalyzes the decarboxylation of 3-keto-L-gulonate-6-P into L-xylulose-5-P. Is involved in the anaerobic L-ascorbate utilization. Belongs to the HPS/KGPDC family. KGPDC subfamily.
   
  
 0.416
Your Current Organism:
Salmonella enterica Typhi
NCBI taxonomy Id: 220341
Other names: S. enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi CT18, Salmonella enterica subsp. enterica serovar Typhi str. CT18, Salmonella enterica subsp. enterica serovar Typhi strain CT18, Salmonella typhi CT18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.