Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PFL_0118 | gcdH | PFL_0118 | PFL_0117 | CoA-transferase, family III; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | glutaryl-CoA dehydrogenase; Identified by similarity to SP:Q92947; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | 0.859 |
| PFL_0118 | gcdR | PFL_0118 | PFL_0116 | CoA-transferase, family III; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | Transcriptional regulator GcdR; Identified by similarity to GB:ABM69269.1; match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.508 |
| gcdH | PFL_0118 | PFL_0117 | PFL_0118 | glutaryl-CoA dehydrogenase; Identified by similarity to SP:Q92947; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | CoA-transferase, family III; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.859 |
| gcdH | gcdR | PFL_0117 | PFL_0116 | glutaryl-CoA dehydrogenase; Identified by similarity to SP:Q92947; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | Transcriptional regulator GcdR; Identified by similarity to GB:ABM69269.1; match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.557 |
| gcdR | PFL_0118 | PFL_0116 | PFL_0118 | Transcriptional regulator GcdR; Identified by similarity to GB:ABM69269.1; match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | CoA-transferase, family III; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family. | 0.508 |
| gcdR | gcdH | PFL_0116 | PFL_0117 | Transcriptional regulator GcdR; Identified by similarity to GB:ABM69269.1; match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | glutaryl-CoA dehydrogenase; Identified by similarity to SP:Q92947; match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF02771; match to protein family HMM PF08028. | 0.557 |