node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PFL_0190 | PFL_1106 | PFL_0190 | PFL_1106 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | 0.931 |
PFL_0190 | PFL_1403 | PFL_0190 | PFL_1403 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | 0.787 |
PFL_0190 | PFL_1425 | PFL_0190 | PFL_1425 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | GAF domain/cyclic diguanylate phosphodiesterase (EAL) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF01590. | 0.806 |
PFL_0190 | PFL_3251 | PFL_0190 | PFL_3251 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | CHASE3/GAF sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF05227. | 0.790 |
PFL_0190 | PFL_3308 | PFL_0190 | PFL_3308 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | GAF domain/diguanylate cyclase domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254. | 0.771 |
PFL_0190 | PFL_3716 | PFL_0190 | PFL_3716 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | 0.819 |
PFL_0190 | PFL_4239 | PFL_0190 | PFL_4239 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518. | 0.749 |
PFL_0190 | PFL_4322 | PFL_0190 | PFL_4322 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | Sensory box/GGDEF domain/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | 0.778 |
PFL_0190 | PFL_4413 | PFL_0190 | PFL_4413 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00474; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.817 |
PFL_0190 | fitF | PFL_0190 | PFL_2985 | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | Sensory box sensor histidine kinase/response regulator FitF; See Pechy-Tarr et. al. (PMID: 18484997) for more information; identified by similarity to GB:ABY91232.1; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM TIGR00229. | 0.782 |
PFL_1106 | PFL_0190 | PFL_1106 | PFL_0190 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | 0.931 |
PFL_1106 | PFL_1403 | PFL_1106 | PFL_1403 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | 0.995 |
PFL_1106 | PFL_1425 | PFL_1106 | PFL_1425 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | GAF domain/cyclic diguanylate phosphodiesterase (EAL) domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF01590. | 0.989 |
PFL_1106 | PFL_3251 | PFL_1106 | PFL_3251 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | CHASE3/GAF sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01590; match to protein family HMM PF02518; match to protein family HMM PF05227. | 0.988 |
PFL_1106 | PFL_3308 | PFL_1106 | PFL_3308 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | GAF domain/diguanylate cyclase domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00254. | 0.968 |
PFL_1106 | PFL_3716 | PFL_1106 | PFL_3716 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | Diguanylate cyclase (GGDEF) domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254. | 0.953 |
PFL_1106 | PFL_4239 | PFL_1106 | PFL_4239 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518. | 0.973 |
PFL_1106 | PFL_4322 | PFL_1106 | PFL_4322 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | Sensory box/GGDEF domain/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254. | 0.993 |
PFL_1106 | PFL_4413 | PFL_1106 | PFL_4413 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00474; match to protein family HMM PF00512; match to protein family HMM PF02518. | 0.974 |
PFL_1106 | fitF | PFL_1106 | PFL_2985 | Response regulator/EAL domain protein; Identified by match to protein family HMM PF00072; match to protein family HMM PF00563. | Sensory box sensor histidine kinase/response regulator FitF; See Pechy-Tarr et. al. (PMID: 18484997) for more information; identified by similarity to GB:ABY91232.1; match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF01627; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM TIGR00229. | 0.969 |