PFL_2000 protein (Pseudomonas protegens) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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[Homology]

Score

PFL_2000

Conserved hypothetical protein. (217 aa)

Predicted Functional Partners:

PFL_2001

0.859

PFL_1998

0.857

PFL_1999

0.857

PFL_2002

0.837

PFL_1995

0.793

PFL_1993

0.711

PFL_2005

0.692

PFL_2006

0.692

PFL_2004

0.673

PFL_1997

0.656

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
PFL_1993	PFL_1995	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	0.979
PFL_1993	PFL_1997	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Conserved hypothetical protein.	0.977
PFL_1993	PFL_1998	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Conserved hypothetical protein.	0.921
PFL_1993	PFL_1999	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Conserved hypothetical protein.	0.660
PFL_1993	PFL_2000	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Conserved hypothetical protein.	0.711
PFL_1993	PFL_2001	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Conserved hypothetical protein.	0.797
PFL_1993	PFL_2002	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Phage baseplate assembly V family protein; Identified by match to protein family HMM PF04717; match to protein family HMM TIGR01644.	0.941
PFL_1993	PFL_2004	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Hypothetical protein; Identified by glimmer; putative.	0.911
PFL_1993	PFL_2005	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Baseplate J-like protein; Identified by match to protein family HMM PF04865.	0.930
PFL_1993	PFL_2006	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	Phage tail protein I; Identified by similarity to SP:P26701; match to protein family HMM PF09684; match to protein family HMM TIGR01634.	0.925
PFL_1995	PFL_1993	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Phage terminase, large subunit, GpA family; Identified by match to protein family HMM PF05876.	0.979
PFL_1995	PFL_1997	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Conserved hypothetical protein.	0.966
PFL_1995	PFL_1998	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Conserved hypothetical protein.	0.921
PFL_1995	PFL_1999	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Conserved hypothetical protein.	0.662
PFL_1995	PFL_2000	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Conserved hypothetical protein.	0.793
PFL_1995	PFL_2001	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Conserved hypothetical protein.	0.663
PFL_1995	PFL_2002	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Phage baseplate assembly V family protein; Identified by match to protein family HMM PF04717; match to protein family HMM TIGR01644.	0.874
PFL_1995	PFL_2004	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Hypothetical protein; Identified by glimmer; putative.	0.775
PFL_1995	PFL_2005	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Baseplate J-like protein; Identified by match to protein family HMM PF04865.	0.840
PFL_1995	PFL_2006	Portal protein, lambda family; Identified by match to protein family HMM PF05136; match to protein family HMM TIGR01539.	Phage tail protein I; Identified by similarity to SP:P26701; match to protein family HMM PF09684; match to protein family HMM TIGR01634.	0.826

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