STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcsPhosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (238 aa)    
Predicted Functional Partners:
cdsA_1
Phosphatidate cytidylyltransferase; Identified by similarity to SP:P0ABG1; match to protein family HMM PF01148; Belongs to the CDS family.
    
 0.924
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.924
PFL_6195
CDP-alcohol phosphatidyltransferase; Identified by match to protein family HMM PF01066.
  
 
 0.915
pssA_2
CDP-diacylglycerol--serine O-phosphatidyltransferase; Identified by similarity to SP:P23830; match to protein family HMM PF00614.
    
 0.907
cdsA_2
Phosphatidate cytidylyltransferase; Identified by match to protein family HMM PF01148.
    
  0.907
pssA_1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Identified by similarity to SP:Q48269; match to protein family HMM PF01066; match to protein family HMM TIGR00473; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.905
PFL_3126
Phospholipase C, phosphocholine-specific; Identified by match to protein family HMM PF04185; match to protein family HMM PF05506; match to protein family HMM TIGR03396.
     
  0.900
PFL_3322
Identified by match to protein family HMM PF00445; Belongs to the RNase T2 family.
  
     0.539
PFL_4056
Conserved hypothetical protein.
       0.493
ampC
Beta-lactamase; Identified by similarity to SP:P24735; match to protein family HMM PF00144.
     
 0.475
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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