phrB protein (Pseudomonas protegens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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Predicted Interactions

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Score

phrB

Deoxyribodipyrimidine photolyase; Identified by similarity to SP:P00914; match to protein family HMM PF00875; match to protein family HMM PF03441; Belongs to the DNA photolyase family. (481 aa)

Predicted Functional Partners:

PFL_5145

0.969

PFL_5146

0.907

PFL_5150

0.899

PFL_5151

0.865

PFL_5152

0.855

PFL_5149

0.835

PFL_5148

0.825

PFL_5153

0.807

PFL_5154

0.653

PFL_0952

0.613

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFL_0952	PFL_5145	PFL_0952	PFL_5145	Transcriptional regulator, MerR family; Identified by similarity to PIR:S68198; match to protein family HMM PF00376.	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	0.535
PFL_0952	PFL_5148	PFL_0952	PFL_5148	Transcriptional regulator, MerR family; Identified by similarity to PIR:S68198; match to protein family HMM PF00376.	Conserved hypothetical protein; Identified by match to protein family HMM PF07366.	0.456
PFL_0952	PFL_5149	PFL_0952	PFL_5149	Transcriptional regulator, MerR family; Identified by similarity to PIR:S68198; match to protein family HMM PF00376.	Short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.	0.401
PFL_0952	phrB	PFL_0952	PFL_5147	Transcriptional regulator, MerR family; Identified by similarity to PIR:S68198; match to protein family HMM PF00376.	Deoxyribodipyrimidine photolyase; Identified by similarity to SP:P00914; match to protein family HMM PF00875; match to protein family HMM PF03441; Belongs to the DNA photolyase family.	0.613
PFL_5145	PFL_0952	PFL_5145	PFL_0952	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Transcriptional regulator, MerR family; Identified by similarity to PIR:S68198; match to protein family HMM PF00376.	0.535
PFL_5145	PFL_5146	PFL_5145	PFL_5146	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	0.896
PFL_5145	PFL_5148	PFL_5145	PFL_5148	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Conserved hypothetical protein; Identified by match to protein family HMM PF07366.	0.835
PFL_5145	PFL_5149	PFL_5145	PFL_5149	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.	0.786
PFL_5145	PFL_5150	PFL_5145	PFL_5150	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Monoamine oxidase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.	0.802
PFL_5145	PFL_5151	PFL_5145	PFL_5151	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Conserved hypothetical protein; Identified by match to protein family HMM PF07103.	0.802
PFL_5145	PFL_5152	PFL_5145	PFL_5152	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242.	0.859
PFL_5145	PFL_5153	PFL_5145	PFL_5153	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Putative membrane protein.	0.816
PFL_5145	PFL_5154	PFL_5145	PFL_5154	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Conserved hypothetical protein; Identified by similarity to GB:CAG20701.1; match to protein family HMM PF03692.	0.651
PFL_5145	phrB	PFL_5145	PFL_5147	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	Deoxyribodipyrimidine photolyase; Identified by similarity to SP:P00914; match to protein family HMM PF00875; match to protein family HMM PF03441; Belongs to the DNA photolyase family.	0.969
PFL_5146	PFL_5145	PFL_5146	PFL_5145	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	Conserved hypothetical protein; Identified by match to protein family HMM PF04463; match to protein family HMM PF08349.	0.896
PFL_5146	PFL_5148	PFL_5146	PFL_5148	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	Conserved hypothetical protein; Identified by match to protein family HMM PF07366.	0.844
PFL_5146	PFL_5149	PFL_5146	PFL_5149	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	Short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.	0.838
PFL_5146	PFL_5150	PFL_5146	PFL_5150	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	Monoamine oxidase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.	0.810
PFL_5146	PFL_5151	PFL_5146	PFL_5151	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	Conserved hypothetical protein; Identified by match to protein family HMM PF07103.	0.786
PFL_5146	PFL_5152	PFL_5146	PFL_5152	Transcriptional regulator, MerR family; Identified by match to protein family HMM PF00376.	Cyclopropane-fatty-acyl-phospholipid synthase; Identified by match to protein family HMM PF02353; match to protein family HMM PF08241; match to protein family HMM PF08242.	0.763

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