STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_00526-pyruvoyl-tetrahydropterin synthase family protein. (122 aa)    
Predicted Functional Partners:
nrdG
Anaerobic ribonucleotide reductase activator protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.
  
  
 0.907
lp_2143
Exosortase (transpeptidase), TIGR03110 family.
 
  
 0.903
lp_2141
Hypothetical membrane protein, TIGR03766 family.
 
    0.829
ica2
Glycosyltransferase, family 2 (GT2), TIGR03111 family.
 
  
 0.825
lp_2145
Extracellular protein, cell-wall anchored.
 
    0.740
folE
GTP cyclohydrolase I.
  
 
 0.709
cysS
cysteine-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.557
pnbA
Nitrobenzoate reductase.
  
 
 0.553
lp_3017
Hypothetical protein.
  
     0.515
ribA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family. In the N-terminal section; belongs to the DHBP synthase family.
  
  
 0.494
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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