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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0077Hypothetical protein, DUF1835 and DUF3658 family domains. (228 aa)    
Predicted Functional Partners:
fusA1
Elongation factor G.
  
  
 0.905
lp_0078
Permease, drug/metabolite transporter (DMT) superfamily.
 
    0.848
azoR1
FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.
  
  
 0.813
lp_3077
Extracellular protein.
  
     0.612
baiE
Bile acid 7-alpha-dehydratase.
  
    0.544
lp_1767
Glycosyl hydrolase, family 25.
  
     0.504
lp_1342
Short-chain dehydrogenase/oxidoreductase,NAD(P)-dependent.
  
     0.500
lp_2810
Glycosyl hydrolase, family 25.
  
    0.491
lp_3164
Transcription regulator, TetR family.
  
     0.482
lp_0080
Acetyltransferase, GNAT family.
  
    0.481
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.