STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0082Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family protein. (334 aa)    
Predicted Functional Partners:
adhE
Bifunctional protein: alcohol dehydrogenase; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 0.922
adh1
Alcohol dehydrogenase, zinc-binding.
 
 
 0.908
adh2
Alcohol dehydrogenase, zinc-binding.
 
 
 0.906
fabF
3-oxoacyl-[acyl-carrier protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
  
 0.815
lp_0081
ThiJ/PfpI family protein, Type 1 glutamine amidotransferase (GATase1)-like domain.
  
 
 0.704
fabD
[acyl-carrier protein] S-malonyltransferase.
 
    
 0.621
lp_1918
NAD(P)(H)-dependent oxidoreductase, quinone oxidoreductase (QOR) family.
  
    0.603
lp_0083
Transcription regulator, ArsR family.
  
    0.545
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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