Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
asp1 | asp2 | lp_0929 | lp_0930 | Alkaline shock protein. | Alkaline shock protein. | 0.992 |
asp1 | thiM | lp_0929 | lp_0113 | Alkaline shock protein. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.417 |
asp2 | asp1 | lp_0930 | lp_0929 | Alkaline shock protein. | Alkaline shock protein. | 0.992 |
asp2 | thiM | lp_0930 | lp_0113 | Alkaline shock protein. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.429 |
lp_0117 | thiD | lp_0117 | lp_0114 | Glutamine amidotransferase, class I. | Phosphomethylpyrimidine kinase & hydroxymethylpyrimidine kinase. | 0.568 |
lp_0117 | thiE | lp_0117 | lp_0115 | Glutamine amidotransferase, class I. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.576 |
lp_0117 | thiM | lp_0117 | lp_0113 | Glutamine amidotransferase, class I. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.508 |
lp_0117 | thiP | lp_0117 | lp_0116 | Glutamine amidotransferase, class I. | Hydroxymethylpyrimidine permease. | 0.551 |
moaD | moeB | lp_1479 | lp_1496 | Molybdopterin converting factor, small subunit. | Molybdopterin biosynthesis protein MoeB. | 0.998 |
moaD | thiM | lp_1479 | lp_0113 | Molybdopterin converting factor, small subunit. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.601 |
moeB | moaD | lp_1496 | lp_1479 | Molybdopterin biosynthesis protein MoeB. | Molybdopterin converting factor, small subunit. | 0.998 |
moeB | thiD | lp_1496 | lp_0114 | Molybdopterin biosynthesis protein MoeB. | Phosphomethylpyrimidine kinase & hydroxymethylpyrimidine kinase. | 0.743 |
moeB | thiE | lp_1496 | lp_0115 | Molybdopterin biosynthesis protein MoeB. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.906 |
moeB | thiM | lp_1496 | lp_0113 | Molybdopterin biosynthesis protein MoeB. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.411 |
thiD | lp_0117 | lp_0114 | lp_0117 | Phosphomethylpyrimidine kinase & hydroxymethylpyrimidine kinase. | Glutamine amidotransferase, class I. | 0.568 |
thiD | moeB | lp_0114 | lp_1496 | Phosphomethylpyrimidine kinase & hydroxymethylpyrimidine kinase. | Molybdopterin biosynthesis protein MoeB. | 0.743 |
thiD | thiE | lp_0114 | lp_0115 | Phosphomethylpyrimidine kinase & hydroxymethylpyrimidine kinase. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.999 |
thiD | thiM | lp_0114 | lp_0113 | Phosphomethylpyrimidine kinase & hydroxymethylpyrimidine kinase. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.999 |
thiD | thiP | lp_0114 | lp_0116 | Phosphomethylpyrimidine kinase & hydroxymethylpyrimidine kinase. | Hydroxymethylpyrimidine permease. | 0.930 |
thiE | lp_0117 | lp_0115 | lp_0117 | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | Glutamine amidotransferase, class I. | 0.576 |
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