STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0163acyl-CoA dehydrogenase domain protein. (513 aa)    
Predicted Functional Partners:
glcD
Glycolate dehydrogenase, subunit GlcD,FAD-binding.
 
 
 0.918
adhE
Bifunctional protein: alcohol dehydrogenase; acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.883
lp_1374
Bifunctional protein: homocysteine methyltransferase (cobalamin-dependent); methylenetetrahydrofolate reductase.
 
  
 0.851
pdhC
Pyruvate dehydrogenase complex, E2 component; dihydrolipoamide S-acetyltransferase.
 
 
 0.818
pdhB
Pyruvate dehydrogenase complex, E1 component,beta subunit.
 
 
 0.812
npsA
Non-ribosomal peptide synthetase NpsA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.806
lp_0146
NADH:flavin oxidoreductase/NADH oxidase.
  
 
 0.776
lp_1350
NADH:flavin oxidoreductase/NADH oxidase.
  
 
 0.776
pepI
Prolyl aminopeptidase; Releases the N-terminal proline from various substrates.
  
 
 0.774
citE
Citrate lyase, beta chain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.751
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.