STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lp_0178Maltodextrin ABC transporter, accessory protein. (276 aa)    
Predicted Functional Partners:
mdxF
Maltodextrin ABC transporter, permease protein.
 
 
 0.998
mdxG
Maltodextrin ABC transporter, permease protein.
 
 
 0.998
mdxE
Maltodextrin ABC transporter, substrate binding protein.
 
 
 0.997
msmX
Maltodextrin ABC transporter, ATP-binding protein.
  
 
 0.991
malS
Alpha-amylase, maltodextrins and cyclomaltodextrins.
 
    0.956
mapB
Maltose phosphorylase.
  
  
 0.921
mapA
Maltose phosphorylase.
  
  
 0.814
lp_2485
Hypothetical protein, DUF1975 family.
  
     0.728
pbg5
6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
   
    0.710
malA1
Maltase/sucrase.
  
  
 0.698
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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