Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pts1BCAPTS system, oligosucrose-specific EIIBCA component. (651 aa)    
Predicted Functional Partners:
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
 0.998
pts26BCA
PTS system, sucrose-specific EIIBCA component.
 
0.993
gcnA
Beta hexosamidase or lacto-N-biosidase or beta N-acetylglucosamidase.
  
  
 0.978
ptsH
Phosphocarrier protein Hpr.
  
 0.970
pts5ABC
PTS system, trehalose-specific IIBC component.
 
 
0.944
pts4ABC
PTS system, trehalose-specific IIBC component.
 
 
0.943
fruA
PTS system, fructose-specific EIIABC component.
   
  
 0.943
pts28ABC
PTS system, beta-glucosides-specific EIIABC component.
 
 
0.941
pts32BC
PTS system sucrose-specific EIIBC component.
 
0.941
pts33BCA
PTS system beta-glucoside-specific EIIBCA component.
 
 
0.939
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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