Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lp_0189Raffinose-6-phosphate hydrolase & stachyose-6-phosphate hydrolase. (558 aa)    
Predicted Functional Partners:
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.992
melA
Alpha-galactosidase.
  
 
 0.929
lp_2757
Maltogenic alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
 
 
0.928
lp_3220
Sucrose/trehalose-6-phosphate hydrolase,glycosyl hydrolase family 13.
  
 
0.925
malS
Alpha-amylase, maltodextrins and cyclomaltodextrins.
 
 
0.922
agl
Alpha-glucosidase (malto-oligosaccharides); Belongs to the glycosyl hydrolase 31 family.
  
 
 0.918
malA1
Maltase/sucrase.
  
 
 
0.917
scrR
Oligosucrose operon repressor.
  
  
 0.912
lp_0193
Exo alfa-1,4-glucosidase or trehalase.
  
 
0.910
lp_3627
Exo-alfa-1,4-glucosidase.
  
  
 
0.902
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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