Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| lp_0208 | lp_0209 | lp_0208 | lp_0209 | Hypothetical protein, DUF1801 family. | RNA-binding protein, DUF814 family. | 0.883 |
| lp_0209 | lp_0208 | lp_0209 | lp_0208 | RNA-binding protein, DUF814 family. | Hypothetical protein, DUF1801 family. | 0.883 |
| lp_0209 | lp_0541 | lp_0209 | lp_0541 | RNA-binding protein, DUF814 family. | Ribosome-associated heat shock protein. | 0.681 |
| lp_0209 | lp_0918 | lp_0209 | lp_0918 | RNA-binding protein, DUF814 family. | Superfamily I DNA/RNA helicase. | 0.728 |
| lp_0209 | lp_0932 | lp_0209 | lp_0932 | RNA-binding protein, DUF814 family. | Extracellular lipoprotein precursor. | 0.709 |
| lp_0209 | lp_1539 | lp_0209 | lp_1539 | RNA-binding protein, DUF814 family. | Lipoprotein precursor. | 0.690 |
| lp_0209 | mutS | lp_0209 | lp_2271 | RNA-binding protein, DUF814 family. | DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. | 0.702 |
| lp_0209 | rplE | lp_0209 | lp_1047 | RNA-binding protein, DUF814 family. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.671 |
| lp_0209 | rplF | lp_0209 | lp_1051 | RNA-binding protein, DUF814 family. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.670 |
| lp_0209 | rplM | lp_0209 | lp_1077 | RNA-binding protein, DUF814 family. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.680 |
| lp_0209 | rpmD | lp_0209 | lp_1054 | RNA-binding protein, DUF814 family. | 50S ribosomal protein L30. | 0.673 |
| lp_0541 | lp_0209 | lp_0541 | lp_0209 | Ribosome-associated heat shock protein. | RNA-binding protein, DUF814 family. | 0.681 |
| lp_0541 | rplE | lp_0541 | lp_1047 | Ribosome-associated heat shock protein. | 50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.770 |
| lp_0541 | rplF | lp_0541 | lp_1051 | Ribosome-associated heat shock protein. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.772 |
| lp_0541 | rplM | lp_0541 | lp_1077 | Ribosome-associated heat shock protein. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.767 |
| lp_0541 | rpmD | lp_0541 | lp_1054 | Ribosome-associated heat shock protein. | 50S ribosomal protein L30. | 0.771 |
| lp_0918 | lp_0209 | lp_0918 | lp_0209 | Superfamily I DNA/RNA helicase. | RNA-binding protein, DUF814 family. | 0.728 |
| lp_0932 | lp_0209 | lp_0932 | lp_0209 | Extracellular lipoprotein precursor. | RNA-binding protein, DUF814 family. | 0.709 |
| lp_0932 | lp_1539 | lp_0932 | lp_1539 | Extracellular lipoprotein precursor. | Lipoprotein precursor. | 0.782 |
| lp_1539 | lp_0209 | lp_1539 | lp_0209 | Lipoprotein precursor. | RNA-binding protein, DUF814 family. | 0.690 |
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