STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpk2Two-component system histidine protein kinase; sensor protein. (458 aa)    
Predicted Functional Partners:
rrp2
Two-component system response regulator.
 
 0.979
rrp1
Two-component system response regulator.
 
 0.891
rrp3
Two-component system response regulator,phosphate transport regulon.
 
 0.884
rrp5
Two-component system response regulator.
 
 0.869
rrp7
Two-component system response regulator.
 
 0.857
rrp11
Two component system response regulator.
 
 0.848
pdhC
Pyruvate dehydrogenase complex, E2 component; dihydrolipoamide S-acetyltransferase.
    
 0.661
plnC
Two-component response regulator PlnC,activator.
  
 
 0.589
plnD
Two-component response regulator PlnD,repressor.
  
 
 0.589
lp_0284
Hypothetical protein.
       0.520
Your Current Organism:
Lactobacillus plantarum
NCBI taxonomy Id: 220668
Other names: L. plantarum WCFS1, Lactobacillus plantarum WCFS1, Lactobacillus plantarum str. WCFS1, Lactobacillus plantarum strain WCFS1
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